Job Description P14081 Confidence 98.59% Date Thu Jan 5 11:33:54 GMT 2012 Rank 287 Aligned Residues 159 % Identity 15% Template c3l2oB_ PDB info PDB header:protein binding/cell cycle Chain: B: PDB Molecule:f-box only protein 4; PDBTitle: structure-based mechanism of dimerization-dependent ubiquitination by2 the scffbx4 ubiquitin ligase Resolution 2.80 Å

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		3	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20		.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.				.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure								.													.				.	.	.																																		.	.	.
Query SS confidence								.													.				.	.	.																																		.	.	.
Query Sequence		I	A	T	A	G	H	.	V	D	H	G	K	T	T	L	L	Q	A	I	.	T	G	V	.	.	.	N	A	D	R	L	P	E	E	K	K	R	G	M	T	I	D	L	G	Y	A	Y	W	P	Q	P	D	G	R	V	P	G	F	I	.	.	.	D	V	P	G	H	E	K	F	L	S	N	M	L	A	G	V	G	G
Query Conservation								.													.				.	.	.																																		.	.	.
Alig confidence								.													.				.	.	.														.	.	.																		.	.	.
Template Conservation																																									.	.	.
Template Sequence		F	A	M	F	G	P	G	L	E	E	L	N	T	S	L	V	L	S	L	M	S	S	E	E	L	C	P	T	A	G	L	P	Q	R	Q	I	D	G	I	.	.	.	G	S	G	V	N	F	Q	L	N	N	Q	H	K	F	N	I	L	I	L	Y	S	T	T	R	R	Y	S	V	I	P	Q	I	Q	K	V	C	E	V
Template Known Secondary structure							T					S	S	S							T	T		G	G	G							S	T	T	T		S	S	S	.	.	.									T	T	T									S
Template Predicted Secondary structure																																									.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.				.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.				90	.	.	.	.	.	.	.						.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.									.	.	.	.	.
Query SS confidence																	.	.	.									.	.	.	.	.
Query Sequence		I	D	H	A	L	L	V	V	A	C	D	D	G	V	M	.	.	.	A	Q	T	R	E	H	L	A	.	.	.	.	.	I	L	Q	L	T	G	N	P	M	L	T	V	A	L	T	K	A	D	R	V	D	E	A	R	V	D	E	V	E	R	Q	V	K	E	V	L	R	E	Y	G	F	A	E	A	K	L	F	I	T
Query Conservation																	.	.	.									.	.	.	.	.
Alig confidence																	.	.	.									.	.	.	.	.																																						.	.	.
Template Conservation																																																																						.	.	.
Template Sequence		V	D	G	F	I	Y	V	A	N	A	E	A	H	K	R	H	E	W	Q	D	E	F	S	H	I	M	A	M	T	D	P	A	F	G	S	S	G	R	P	L	L	V	L	S	C	I	S	Q	G	D	V	K	R	M	P	C	F	Y	L	A	H	E	L	H	L	N	L	L	.	.	.	N	H	P	W	L	V	Q	D	T
Template Known Secondary structure			S							B		B	T	T																							T	T										S	S	T	T	S		B										T	T	G	G	G	G	.	.	.		S
Template Predicted Secondary structure																																																																						.	.	.
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.				.	.	.	.	.	.	360	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	T	E	G	R	G	M	D	A	L	R	E	H	L	L	Q	L	P	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	E	T	L	T	G	F	L	N	G	I	E	W	I	L	E	E	V	E	S
Template Known Secondary structure			T	T	T		T	T												S
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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