Job Description P14081 Confidence 99.30% Date Thu Jan 5 11:33:54 GMT 2012 Rank 155 Aligned Residues 141 % Identity 21% Template c3geiB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:trna modification gtpase mnme; PDBTitle: crystal structure of mnme from chlorobium tepidum in complex2 with gcp Resolution 3.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	I	A	T	A	G	H	V	D	H	G	K	T	T	L	L	Q	A	I	T	G	V	N	A	D	R	L	P	E	E	K	K	R	G	M	T	I	D	L	G	Y	A	Y	W	P	Q	P	D	G	R	V	P	G	F	I	D	V	P	G	H	E	K	F	L	S	N	M	L	A	G	V	G	G	I	D	H	A	L	L
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.															.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	S	T	V	I	A	G	K	P	N	A	G	K	S	T	L	L	N	T	L	L	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	F	I	H	.	D	K	T	M	F	R	L	T	D	M	K	M	A	E	.	.	.	.	.	.	.	.	.	.	.	.	A	D	L	I	L	Y
Template Known Secondary structure										T	T	S	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	T	T											S	S	.	.	.	.	.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.															.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.																					.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.													.	.	.	.	.	.
		81	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		V	V	A	.	C	D	D	G	V	M	A	Q	T	R	E	H	L	A	I	L	Q	L	T	G	N	P	M	L	T	V	A	L	T	K	A	D	R	V	D	E	A	R	V	D	E	V	E	R	Q	V	K	E	V	L	R	E	Y	G	F	A	E	A	K	L	F	I	T	A	A	T	E	G	R	G	M	D	A	L	R	E
Query Conservation					.
Alig confidence					.																																					.	.													.	.	.	.	.	.
Template Conservation																																										.	.													.	.	.	.	.	.
Template Sequence		L	L	D	L	G	T	E	R	L	D	D	E	L	T	E	I	R	E	L	K	A	A	H	P	A	A	K	F	L	T	V	A	N	K	L	D	R	A	A	N	.	.	A	D	A	L	I	R	A	I	A	D	G	T	.	.	.	.	.	.	G	T	E	V	I	G	I	S	A	L	N	G	D	G	I	D	T	L	K	Q
Template Known Secondary structure					T	T	T	S	S	S			T	T											T	T	S									T	T	T		S	S	.	.											T	T	.	.	.	.	.	.	T	S						B	T	T	T	T	B	S
Template Predicted Secondary structure																																										.	.													.	.	.	.	.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.			.	.	.	.	360	.	.	.	.	.	.	.							.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	L	Q	L	P	E	R	E	H	A	S	Q	H	S	F	R	L	A	I	D	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	M	G	D	L	V	K	S	V	L	V	T	S	L	R	H	Y	E	A	L	R	N	A
Template Known Secondary structure				T	T	T	T							S	T	T
Template Predicted Secondary structure
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions