Job Description P14081 Confidence 99.25% Date Thu Jan 5 11:33:54 GMT 2012 Rank 164 Aligned Residues 151 % Identity 16% Template c3dpuA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:rab family protein; PDBTitle: roccor domain tandem of rab family protein (roco) Resolution 2.90 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		I	A	T	A	G	H	V	D	H	G	K	T	T	L	L	Q	A	I	T	G	V	N	.	A	D	R	L	P	E	E	K	K	R	G	M	T	I	D	L	G	Y	A	Y	W	P	Q	P	D	G	R	V	P	G	F	I	D	V	P	G	H	E	K	F	L	S	N	M	L	A	G	V	G	G	I	D	H	A	L	L	V
Query Conservation																								.
Alig confidence																								.																	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.
Template Sequence		V	H	L	I	G	D	G	M	A	G	K	T	S	L	L	K	Q	L	I	G	G	L	N	V	V	T	K	Q	A	P	N	I	K	G	L	E	N	D	D	.	.	.	.	.	.	E	L	K	E	C	L	F	H	F	W	D	F	G	G	Q	E	I	M	H	A	S	H	Q	F	F	M	T	R	S	S	V	Y	M	L	L
Template Known Secondary structure						S	S	S		S	S																			G	G	G	S	G	G	G	T	T		S	.	.	.	.	.	.	T	T	T	T										S			T	T	T	T	T							S	S
Template Predicted Secondary structure																																									.	.	.	.	.	.
Template SS confidence
		455	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.							.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	C	D	D	G	V	M	A	Q	T	R	E	H	L	A	I	L	Q	L	T	G	N	P	M	L	T	V	A	L	T	K	A	D	R	V	D	E	A	R	V	D	E	V	E	R	Q	V	K	E	V	L	R	E	Y	G	F	A	E	A	K	L	F	I	T	A	A	T	E	G	R	G	M	D	A	L	R	E	H	L
Query Conservation
Alig confidence																										.																			.	.											.	.	.													.
Template Conservation																										.																			.	.											.	.	.													.
Template Sequence		L	D	S	R	T	D	S	N	K	H	Y	W	L	R	H	I	E	K	Y	G	G	K	S	P	.	V	I	V	V	M	N	K	I	D	E	N	P	S	Y	N	I	E	Q	.	.	K	K	I	N	E	R	F	P	A	I	.	.	.	E	N	R	F	H	R	I	S	C	V	E	S	.	I	A	K	S	L	K	S	A	V
Template Known Secondary structure				G	G	G	G	G	G												S	S	S			.								T	T	T		T	T						.	.								G	G	G	.	.	.	T	T									T	T	.
Template Predicted Secondary structure																										.																			.	.											.	.	.													.
Template SS confidence
		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.		.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.			.	.	.	.	.	.	.	.	590	.				.	.	.	.	.	.	.	.	600	.	.	.		.	.	.	.	.	.	610	.	.
		162	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	L	P	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	H	P	D	S
Template Known Secondary structure		T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		618	.	620	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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