Return to main results Retrieve Phyre Job Id

Job DescriptionP14081
Confidence98.93%DateThu Jan 5 11:33:54 GMT 2012
Rank249Aligned Residues144
% Identity17%Templatec3bwdD_
PDB info PDB header:plant proteinChain: D: PDB Molecule:rac-like gtp-binding protein arac6; PDBTitle: crystal structure of the plant rho protein rop5
Resolution1.53 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  IATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYAYWPQPDGRVPGFIDVPGHEKFLSNMLAGVGGIDHALLVV
Query Conservation 














 



   
   

  







 
         
 


 



 

  

 
    
 




Alig confidence 





















....................













.






















Template Conservation 
 


   






 
     ....................
             .                
      
Template Sequence  CVTVGDGAVGKTCLLISYTSNT. . . . . . . . . . . . . . . . . . . . FPFSANVVLGLWDT. AGEDYNRLRPLSYRGADVFILAF
Template Known Secondary structure 
STTSSS
....................


B






.


TTTTTGGGGGTT
S
Template Predicted Secondary structure 







....................





.











Template SS confidence 















































































   910.........20.........30 .........40.... .....50.........60.......
 
   83..... .90.........100.........110.........120....... ..130.........140.........150....
Predicted Secondary structure 




....










....











Query SS confidence 





. . . .






































. . . .


























Query Sequence  ACDDGV. . . . MAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVER. . . . QVKEVLREYGFAEAKLFITAATEGRGM
Query Conservation 

  
 ....  

 


 
   


   





 


  
  
    ....

   
        


 


 

 

Alig confidence 





....
















.




















....


























Template Conservation        

                   .      
 

                                
 




  
Template Sequence  SLISKASYENVSKKWIPELKHYAPGVP. IVLVGTKLDLRDDKQFFIDHAVPITTVQGEELKKLIGAPAYIECSSKSQENV
Template Known Secondary structure  TT
T
TT

.
T






T
S

TTT
TT
Template Predicted Secondary structure 








.


















Template SS confidence 















































































   86...90.........100.........110.. .......120.........130.........140.........150.........160....
 
   155....160........
Predicted Secondary structure 




Query SS confidence 













Query Sequence  DALREHLLQLPERE
Query Conservation    
   
       
Alig confidence 













Template Conservation   
 
  
    
 
Template Sequence  KGVFDAAIRVVLQP
Template Known Secondary structure  S

Template Predicted Secondary structure 


Template SS confidence 













   167..170.........180
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions