Job Description P14081 Confidence 99.23% Date Thu Jan 5 11:33:54 GMT 2012 Rank 166 Aligned Residues 142 % Identity 20% Template c2zejA_ PDB info PDB header:transferase Chain: A: PDB Molecule:leucine-rich repeat kinase 2; PDBTitle: structure of the roc domain from the parkinson's disease-associated2 leucine-rich repeat kinase 2 reveals a dimeric gtpase Resolution 2.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	T	A	G	H	V	D	H	G	K	T	T	L	L	Q	A	I	T	G	V	N	A	D	R	L	P	E	E	K	K	R	G	M	T	I	D	L	G	Y	A	Y	W	P	Q	P	D	G	R	V	P	G	F	I	D	V	P	G	H	E	K	F	L	S	N	M	L	A	G	V	G	G	I	D	H	A	L	L	V	V
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Template Sequence		L	X	I	V	G	N	T	G	S	G	K	T	T	L	L	Q	Q	L	X	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	G	I	D	V	K	D	W	P	I	L	V	.	.	.	L	N	V	W	D	F	A	G	R	E	E	F	Y	S	T	H	P	H	F	X	T	Q	R	A	L	Y	L	A	V	Y
Template Known Secondary structure						S		T	T	S	S									T		.	.	.	.	.	.	.	.	.	.	.	.	.	.			S											.	.	.								S						T	T	S							S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Template SS confidence
		1337	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.															.	.	.	1360	.	.	.	.	.	.	.	.	.				1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.														.																																									.
Query SS confidence											.	.														.																																									.
Query Sequence		A	C	D	D	G	V	M	A	Q	.	.	T	R	E	H	L	A	I	L	Q	L	T	G	N	.	P	M	L	T	V	A	L	T	K	A	D	R	V	D	E	A	R	V	D	E	V	E	R	Q	V	K	E	V	L	R	E	Y	G	F	A	E	A	K	L	F	.	I	T	A	A	T	E	G	R	G	M	D	A	L	R
Query Conservation											.	.														.																																									.
Alig confidence											.	.														.																																		.	.						.
Template Conservation																																																												.	.
Template Sequence		D	L	S	K	G	Q	A	E	V	D	A	X	K	P	W	L	F	N	I	K	A	R	A	S	S	S	P	V	I	L	V	G	T	H	L	D	V	S	D	E	K	Q	R	K	A	C	X	S	K	I	T	K	E	L	L	N	K	R	.	.	G	F	P	A	I	R	D	Y	H	F	V	N	A	T	E	E	S	D	A	L
Template Known Secondary structure			G	G	G							T													T	T										G	G	G																	T	T	T		T	.	.	T	S											T	T	S
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.			.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.
		159	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	L	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	L	R	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1498	.	1500	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions