Job Description P14081 Confidence 100.00% Date Thu Jan 5 11:33:54 GMT 2012 Rank 20 Aligned Residues 247 % Identity 24% Template c2ywfA_ PDB info PDB header:translation Chain: A: PDB Molecule:gtp-binding protein lepa; PDBTitle: crystal structure of gmppnp-bound lepa from aquifex aeolicus Resolution 2.24 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.					.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.
Query SS confidence																																																.	.	.	.
Query Sequence		I	A	T	A	G	H	V	D	H	G	K	T	T	L	L	Q	A	I	T	G	V	N	A	D	R	L	P	E	E	K	K	R	G	M	T	I	D	L	G	Y	A	Y	W	P	Q	P	.	.	.	.	D	G	R	V	P	G	F	I	D	V	P	G	H	E	K	F	L	S	N	M	L	A	G	V	G	G	I	D	H	A
Query Conservation																																																.	.	.	.
Alig confidence																				.	.	.	.	.	.	.																						.	.	.	.
Template Conservation																				.	.	.	.	.	.	.
Template Sequence		F	C	I	I	A	H	V	D	H	G	K	S	T	L	A	D	R	L	.	.	.	.	.	.	.	L	E	Y	T	G	A	I	G	I	T	V	K	M	Q	A	V	R	M	F	Y	K	A	K	D	G	N	T	Y	K	L	H	L	I	D	T	P	G	H	V	D	F	S	Y	E	V	S	R	A	L	A	A	C	E	G	A
Template Known Secondary structure								T	T	S	S									.	.	.	.	.	.	.					T								S		S								T	T	S													S	G	G	G										T		S
Template Predicted Secondary structure																				.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.								.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	V	V	A	C	D	D	G	V	M	A	Q	T	R	E	H	L	A	I	L	Q	L	T	G	N	P	M	L	T	V	A	L	T	K	A	D	R	V	D	E	A	R	V	D	E	V	E	R	Q	V	K	E	V	L	R	E	Y	G	F	A	E	A	K	L	F	I	T	A	A	T	E	G	R	G	M	D	A	L	R
Query Conservation
Alig confidence																													.																.												.	.	.
Template Conservation																													.																.												.	.	.
Template Sequence		L	L	L	I	D	A	S	Q	G	I	E	A	Q	T	V	A	N	F	W	K	A	V	E	Q	D	L	V	.	I	I	P	V	I	N	K	I	D	L	P	S	A	D	V	.	D	R	V	K	K	Q	I	E	E	V	L	.	.	.	G	L	D	P	E	E	A	I	L	A	S	A	K	E	G	I	G	I	E	E	I	L
Template Known Secondary structure							T	T	T		S														T	T			.								T	T	S	T	T				.											T	.	.	.				G	G	G					B	T	T	T	T	B	S
Template Predicted Secondary structure																													.																.												.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.				.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		159	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.				.	.	.	.	230	.	.	.	.
Predicted Secondary structure										.																																																												.	.	.
Query SS confidence										.																																																												.	.	.
Query Sequence		E	H	L	L	Q	L	P	E	.	R	E	H	A	S	Q	H	S	F	R	L	A	I	D	R	A	F	T	V	K	G	A	G	L	V	V	T	G	T	A	L	S	G	E	V	K	V	G	D	S	L	W	L	T	G	V	N	K	P	M	R	V	R	A	L	H	A	Q	N	.	.	.	Q	P	T	E	T	A	N	A	G
Query Conservation										.																																																												.	.	.
Alig confidence										.																																																												.	.	.
Template Conservation
Template Sequence		E	A	I	V	N	R	I	P	P	P	K	G	D	P	Q	K	P	L	K	A	L	I	F	D	S	Y	Y	D	P	Y	R	G	A	V	A	F	V	R	I	F	D	G	E	V	K	P	G	D	K	I	M	L	M	S	T	G	K	E	Y	E	V	T	E	V	G	A	Q	T	P	K	M	T	K	F	D	K	L	S	A	G
Template Known Secondary structure								S							T	T	S													T	T	T											S				T	T						T	T	T	T												S	S	S					S				T	T
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	I	A	L	N	I	A	G	D	A	E	K	E	Q	I	N	R	G	D	W	L	L	A	D	V	P	P
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		D	V	G	Y	I	A	A	S	I	.	K	D	V	R	D	I	R	I	G	D	T	I	T	H	A	K	N	P
Template Known Secondary structure								S			.			G	G	G	S		T	T						S	S	S
Template Predicted Secondary structure											.
Template SS confidence
		256	.	.	.	260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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