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Job DescriptionP14081
Confidence97.47%DateThu Jan 5 11:33:54 GMT 2012
Rank325Aligned Residues160
% Identity22%Templatec2xtzB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:guanine nucleotide-binding protein alpha-1 subunit; PDBTitle: crystal structure of the g alpha protein atgpa1 from2 arabidopsis thaliana
Resolution2.34 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20
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Query Sequence  IATAGHVDHGKTTLLQAI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  LLLLGAGESGKSTIFKQIKLLFQTGFDEGELKSYVPVIHANVYQTIKLLHDGTKEFPRLTKDIAEGIETLWKDPAIQETP
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   41........50.........60.........70.........80.........90.........100.........110.........120
 
   21........30.........40.........50.........60.........70.........80......
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Query Sequence  . . . . . . . . . . . . TGVNADRLPEEKKRGMTIDLGYAYWPQPDGRVPGFIDVPGHEKFLSNMLAGVGGIDHALLVVACDD. .
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Template Sequence  DTKYLMENLKRLSDINYIPTKEDVLYARVRTTGVVEIQF. SPEVYRLFDVGGQRNERRKWIHLFEGVTAVIFCAAISEYD
Template Known Secondary structure 

T
TT









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SGGGGGGTGGG
TTGGGTT
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   162.......170.........180.........190.........200 .........210.........220.........230.........240
 
   87..90.........100. ........110...... ...120.........130.
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Query Sequence  . . . . . . GVMAQTREHLAILQL. . . . . . TGNPMLTVALTKADR. . . . . . . . . . . . . . . . . . . . . . . VDEARVDEVERQVKE
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Template Sequence  QTLFEDEQKNRMMETKELFDWVLKQPCFEKTSFMLFLNKFDIFEKKVLDVPLNVCEWFRDYQPVSSGKQEIEHAYEFVKK
Template Known Secondary structure 
B
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TTSBT
GGGSS

TTTS
GGGSGGGTT




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   250.........260.........270.........280.........290.........300.........310.........320.........
 
   132.... ...140.........150.........160...
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Query Sequence  VLREY. . . . . . . . . GFAEAKLFITAATEGRGMDALREHLLQ
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Template Sequence  KFEELYYQNTAPDRVDRVFKIYRTTALDQKLVKKTFKLVDE
Template Known Secondary structure  T

GGGTTS


TT
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   330.........340.........350.........360.........370
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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