Job Description P14081 Confidence 99.66% Date Thu Jan 5 11:33:54 GMT 2012 Rank 98 Aligned Residues 146 % Identity 14% Template c2wwwB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:methylmalonic aciduria type a protein, PDBTitle: crystal structure of methylmalonic acidemia type a protein Resolution 2.64 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.					.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.						.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.																.	.																							.	.	.	.	.
Query SS confidence																										.	.	.	.																.	.																							.	.	.	.	.
Query Sequence		M	I	I	A	T	A	G	H	V	D	H	G	K	T	T	L	L	Q	A	I	T	G	V	N	.	.	.	.	A	D	R	L	P	E	E	K	K	R	G	M	T	I	D	.	.	L	G	Y	A	Y	W	P	Q	P	D	G	R	V	P	G	F	I	D	V	P	G	H	.	.	.	.	.	E	K	F	L	S	N	M	L
Query Conservation																										.	.	.	.																.	.																							.	.	.	.	.
Alig confidence																										.	.	.	.																.	.										.													.	.	.	.	.
Template Conservation																																																								.
Template Sequence		F	R	V	G	L	S	G	P	P	G	A	G	K	S	T	F	I	E	Y	F	G	K	M	L	T	E	R	G	H	K	L	S	V	L	A	V	D	T	E	L	S	R	D	M	N	A	Y	I	R	P	T	R	T	T	.	N	E	A	I	L	L	C	E	G	A	G	Y	D	I	I	L	I	E	T	V	G	Q	S	E	F
Template Known Secondary structure										T	T	S	S															T	T												S	S	S		T	T							T	T		.										T	T		S
Template Predicted Secondary structure																																																								.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.					.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.
Query SS confidence																																																																			.	.	.	.
Query Sequence		A	G	V	G	G	I	D	H	A	L	L	V	V	A	C	D	D	G	V	M	A	Q	T	R	E	H	L	A	I	L	Q	L	T	G	N	P	M	L	T	V	A	L	T	K	A	D	R	V	D	E	A	R	V	D	E	V	E	R	Q	V	K	E	V	L	R	.	.	.	.	E	Y	G	F	A	E	A	K	L	F	I
Query Conservation																																																																			.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	A	D	M	V	D	M	F	V	L	L	L	P	P	I	I	E	M	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	A	V	T	K	S	D	G	D	L	I	V	P	A	R	R	I	Q	A	E	Y	V	S	A	L	K	L	L	R	K	R	S	Q	V	W	K	P	K	V	I	R
Template Known Secondary structure					T	T	S	S										T	T	S		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S	T	T	S	S															T	T	S			S		S	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.																		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	A	T	E	G	R	G	M	D	A	L	R	E	H	L	L	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	A	R	S	G	E	G	I	S	E	M	W	D	K	M	K	D	F
Template Known Secondary structure				T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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