Job Description P14081 Confidence 99.45% Date Thu Jan 5 11:33:54 GMT 2012 Rank 135 Aligned Residues 158 % Identity 13% Template c2rexD_ PDB info PDB header:signaling protein/lipoprotein Chain: D: PDB Molecule:rho-related gtp-binding protein rho6; PDBTitle: crystal structure of the effector domain of plxnb1 bound with rnd12 gtpase Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	T	A	G	H	V	D	H	G	K	T	T	L	L	Q	A	I	T	G	V	N	A	D	R	L	P	E	E	K	K	R	G	M	T	I	D	L	G	Y	A	Y	W	P	Q	P	D	G	R	V	P	G	F	I	D	V	P	G	H	E	K	F	L	S	N	M	L	A	G	V	G	G	I	D	H	A	L	L	V	V
Query Conservation
Alig confidence																								.	.	.
Template Conservation																								.	.	.
Template Sequence		L	V	L	V	G	D	V	Q	C	G	K	T	A	M	L	Q	V	L	A	K	D	C	.	.	.	Y	P	E	T	Y	V	P	T	V	F	E	N	Y	T	A	C	L	E	T	E	E	Q	R	V	E	L	S	L	W	D	T	S	G	S	P	Y	Y	D	N	V	R	P	L	C	Y	S	D	S	D	A	V	L	L	C	F
Template Known Secondary structure							S	T	T	S	S											S		.	.	.				S					S											S	S													S	G	G	G	T	T	T	G	G	G	G	G	T	T		S
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.				.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.											.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																								.																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.																						.	.	.	.	.	.	.	.	.	.
Query Sequence		A	C	D	D	G	V	M	A	Q	T	R	E	H	L	A	I	L	Q	L	T	G	N	.	P	M	L	T	V	A	L	T	K	A	D	R	V	D	E	A	R	V	D	E	V	.	.	.	.	.	.	.	.	.	.	E	R	Q	V	K	E	V	L	R	E	Y	G	F	A	E	A	K	L	F	I	T	A	A	T	E	G
Query Conservation																								.																						.	.	.	.	.	.	.	.	.	.
Alig confidence																								.																						.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation																																																																				.	.
Template Sequence		D	I	S	R	P	E	T	V	A	L	K	K	W	R	T	E	I	L	D	Y	C	P	S	T	R	V	L	L	I	G	C	K	T	D	L	R	T	D	L	S	T	L	M	E	L	S	H	Q	K	Q	A	P	I	S	Y	E	Q	G	C	A	I	A	K	Q	L	G	.	.	A	E	I	Y	L	E	G	S	A	F	T	S
Template Known Secondary structure			T	T		T	T	T															T	T	S									G	G	G	G	G											T	T																T	T	.	.		S							T	T	T
Template Predicted Secondary structure																																																																				.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170
		152		.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		R	.	G	M	D	A	L	R	E	H	L	L	Q	L	P
Query Conservation			.
Alig confidence			.
Template Conservation
Template Sequence		E	K	S	I	H	S	I	F	R	T	A	S	M	L	C
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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