Job Description P14081 Confidence 99.59% Date Thu Jan 5 11:33:54 GMT 2012 Rank 111 Aligned Residues 158 % Identity 14% Template c2q3fB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:ras-related gtp-binding protein d; PDBTitle: x-ray crystal structure of putative human ras-related gtp2 binding d in complex with gmppnp Resolution 2.10 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.
Query SS confidence																																																																.	.	.
Query Sequence		I	A	T	A	G	H	V	D	H	G	K	T	T	L	L	Q	A	I	T	G	V	N	A	D	R	L	P	E	E	K	K	R	G	M	T	I	D	L	G	Y	A	Y	W	P	Q	P	D	G	R	V	P	G	F	I	D	V	P	G	H	E	K	F	.	.	.	L	S	N	M	L	A	G	V	G	G	I	D	H	A	L
Query Conservation																																																																.	.	.
Alig confidence																								.	.																																							.	.	.
Template Conservation																								.	.
Template Sequence		I	L	L	X	G	L	R	R	S	G	K	S	S	I	Q	K	V	V	F	H	K	X	.	.	S	P	N	E	T	L	F	L	E	S	T	N	K	I	C	R	E	D	V	S	N	S	S	F	V	N	F	Q	I	W	D	F	P	G	Q	I	D	F	F	D	P	T	F	D	Y	E	X	I	F	R	G	T	G	A	L	I
Template Known Secondary structure							S	T	T	S	S										S			.	.		G	G	G	G	G	G						S									S	S											S				T	T		T	T									T
Template Predicted Secondary structure																								.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.					.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.							.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.																															.	.	.	.	.	.
Query SS confidence																										.	.	.	.																															.	.	.	.	.	.
Query Sequence		L	V	V	A	C	D	D	G	V	M	A	Q	T	R	E	H	L	A	I	L	Q	L	T	G	.	.	.	.	N	P	M	L	T	V	A	L	T	K	A	D	R	V	D	E	A	R	V	D	E	V	E	R	Q	V	K	E	V	L	.	.	.	.	.	.	R	E	Y	G	F	A	E	A	K	L	F	I	T	A	A	T
Query Conservation																										.	.	.	.																															.	.	.	.	.	.
Alig confidence																										.	.	.	.																															.	.	.	.	.	.
Template Conservation
Template Sequence		F	V	I	D	S	Q	D	D	Y	X	E	A	L	A	R	L	H	L	T	V	T	R	A	Y	K	V	N	T	D	I	N	F	E	V	F	I	H	K	V	D	G	L	S	D	D	H	K	I	E	T	Q	R	D	I	H	Q	R	A	N	D	D	L	A	D	A	G	L	E	K	I	H	L	S	F	Y	L	T	S	I	Y
Template Known Secondary structure						T	T	S																					T	T										T	T	S	S																							T	T		T	T	S									T	T
Template Predicted Secondary structure
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	R	G	M	D	A	L	R	E	H	L	L	Q
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		D	H	.	S	I	F	E	A	F	S	K	V	V	Q
Template Known Secondary structure		S	S	.
Template Predicted Secondary structure				.
Template SS confidence
		204	.		.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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