Job Description P14081 Confidence 99.04% Date Thu Jan 5 11:33:54 GMT 2012 Rank 222 Aligned Residues 154 % Identity 19% Template c2p5sB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:ras and ef-hand domain containing; PDBTitle: rab domain of human rasef in complex with gdp Resolution 2.15 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	T	A	G	H	V	D	H	G	K	T	T	L	L	Q	A	I	T	G	V	N	A	D	R	L	P	E	E	K	K	R	G	M	T	I	D	L	G	Y	A	Y	W	P	Q	P	D	G	R	V	P	G	F	I	D	V	P	G	H	E	K	F	L	S	N	M	L	A	G	V	G	G	I	D	H	A	L	L	V	V
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.																	.
Template Conservation																									.	.	.	.	.	.	.	.																	.
Template Sequence		I	V	L	A	G	D	A	A	V	G	K	S	S	F	L	M	R	L	C	K	N	E	F	.	.	.	.	.	.	.	.	R	G	V	D	F	Q	M	K	T	L	I	V	D	G	E	R	.	T	V	L	Q	L	W	D	T	A	G	Q	E	R	F	R	S	I	A	K	S	Y	F	R	K	A	D	G	V	L	L	L	Y
Template Known Secondary structure						S	S	T	T	S	S											S			.	.	.	.	.	.	.	.													T	T			.									T	T		T	T													S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.																	.
Template SS confidence
		544	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.									.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.		.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.					.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.
Query SS confidence																																													.	.	.	.
Query Sequence		A	C	D	D	G	V	M	A	Q	T	R	E	H	L	A	I	L	Q	L	T	G	N	P	M	L	T	V	A	L	T	K	A	D	R	V	D	E	A	R	V	D	E	V	.	.	.	.	E	R	Q	V	K	E	V	L	R	E	Y	G	F	A	E	A	K	L	F	I	T	A	A	T	E	G	R	G	M	D	A	L	R
Query Conservation																																													.	.	.	.
Alig confidence																																													.	.	.	.												.	.	.
Template Conservation																																																												.	.	.
Template Sequence		D	V	T	C	E	K	S	F	L	N	I	R	E	W	V	D	M	I	E	D	A	A	V	P	I	M	L	V	G	N	K	A	D	I	R	D	T	A	A	T	E	G	Q	K	C	V	P	G	H	F	G	E	K	L	A	M	T	Y	.	.	.	G	A	L	F	C	E	T	S	A	K	D	G	S	N	I	V	E	A	V
Template Known Secondary structure			T	T							T																						G	G	G							T	T																	.	.	.	T								T	T	T		T	T
Template Predicted Secondary structure																																																												.	.	.
Template SS confidence
		622	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.				680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	L	L	Q	L	P	E	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	H	L	A	R	E	V	K	K	R
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		702	.	.	.	.	.	.	.	710	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions