Job Description P14081 Confidence 99.09% Date Thu Jan 5 11:33:54 GMT 2012 Rank 209 Aligned Residues 153 % Identity 16% Template c2oilA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:ras-related protein rab-25; PDBTitle: crystal structure of human rab25 in complex with gdp Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		I	A	T	A	G	H	V	D	H	G	K	T	T	L	L	Q	A	I	T	G	V	N	A	D	R	L	P	E	E	K	K	R	G	M	T	I	D	L	G	Y	A	Y	W	P	Q	P	D	G	R	V	P	G	F	I	D	V	P	G	H	E	K	F	.	L	S	N	M	L	A	G	V	G	G	I	D	H	A	L	L	V
Query Conservation																																																																.
Alig confidence																								.	.	.																																						.
Template Conservation																								.	.	.
Template Sequence		V	V	L	I	G	E	S	G	V	G	K	T	N	L	L	S	R	F	T	R	N	E	.	.	.	F	S	H	D	S	R	T	T	I	G	V	E	F	S	T	R	T	V	M	L	G	T	A	A	V	K	A	Q	I	W	D	T	A	G	L	E	R	Y	R	A	I	T	S	A	Y	Y	R	G	A	V	G	A	L	L	V
Template Known Secondary structure						S	S	T	T	S	S											S		.	.	.			S	S					S	S											T	T											S				T	T		T	T						T	T
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.				.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.
Query SS confidence																									.	.	.
Query Sequence		V	A	C	D	D	G	V	M	A	Q	T	R	E	H	L	A	I	L	Q	L	T	G	N	.	.	.	P	M	L	T	V	A	L	T	K	A	D	R	V	D	E	A	R	V	D	E	V	E	R	Q	V	K	E	V	L	R	E	Y	G	F	A	E	A	K	L	F	I	T	A	A	T	E	G	R	G	M	D	A	L	R
Query Conservation																									.	.	.
Alig confidence																									.	.	.																																.	.	.	.	.
Template Conservation																																																											.	.	.	.	.
Template Sequence		F	D	L	T	K	H	Q	T	Y	A	V	V	E	R	W	L	K	E	L	Y	D	H	A	E	A	T	I	V	V	M	L	V	G	N	K	S	D	L	S	Q	A	R	E	V	P	T	E	E	A	R	M	F	A	E	N	N	G	.	.	.	.	.	L	L	F	L	E	T	S	A	L	D	S	T	N	V	E	L	A	F
Template Known Secondary structure				T	T							T										T	T	S		T	T										G	G	G	G	G	G			S												T	T	.	.	.	.	.								T	T	T		T	T
Template Predicted Secondary structure																																																											.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.						.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		159	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	L	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	T	V	L	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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