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Job DescriptionP14081
Confidence100.00%DateThu Jan 5 11:33:54 GMT 2012
Rank29Aligned Residues250
% Identity24%Templatec2bm0A_
PDB info PDB header:elongation factorChain: A: PDB Molecule:elongation factor g; PDBTitle: ribosomal elongation factor g (ef-g) fusidic acid resistant2 mutant t84a
Resolution2.4 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  IATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYAYWPQPDGRVPGFIDVPGHEKFLSNMLAGVGGIDHALLVV
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Template Sequence  IGIAAHIDAGKTTTTERILY. . . . . YTGRIHKIATITAAVTTCFWK. DHRINIIDAPGHVDFTIEVERSMRVLDGAIVVF
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   15....20.........30.... .....40.........50..... ....60.........70.........80........
 
   83......90.........100.........110.........120.........130...
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Query Sequence  ACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVL. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  DSSQGVEPQSETVWRQAEKYKVP. RIAFANKMDKTGAD. LWLVIRTMQERLGARPVVMQLPIGREDTFSGIIDVLRMKAY
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TTSSS
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   109110.........120.........130. ........140..... ....150.........160.........170.........180......
 
   134.....140.........150.
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . REYGFAEAKLFITAATEG
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Template Sequence  TYGNDLGTDIREIPIPEEYLDQAREYHEKLVEVAADFDENIMLKYLEGEEPTEEELVAAIRKGTIDLKITPVFLGSALKN
Template Known Secondary structure  SSSSS




GGGGGG
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   187..190.........200.........210.........220.........230.........240.........250.........260......
 
   152.......160.........170. ........180.........190.........200.........210..
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Query Sequence  RGMDALREHLLQLPEREHAS. . . . . . . . . . . . . . . . . . . QHSFRLAIDRAFTVKGAGLVVTGTALSGEVKVGDSLWLTGV
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Template Sequence  KGVQLLLDAVVDYLPSPLDIPPIKGTTPEGEVVEIHPDPNGPLAALAFKIMADPYVGRLTFIRVYSGTLTSGSYVYNTTK
Template Known Secondary structure  BSS

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   267..270.........280.........290.........300.........310.........320.........330.........340......
 
   213......220..... ....230.........240.........250.........260.....
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Query Sequence  NKPMRVRALHAQN. . . . QPTETANAGQRIALNIAGDAEKEQINRGDWLLADVPPEPF
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Template Sequence  GRKERVARLLRMHANHREEVEELKAGDLGAV. . . . . VGLKETITGDTLVGEDAPRVI
Template Known Secondary structure  T
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STT
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   347..350.........360.........370....... ..380.........390........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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