Job Description P14081 Confidence 100.00% Date Thu Jan 5 11:33:54 GMT 2012 Rank 22 Aligned Residues 231 % Identity 30% Template c1zo1I_ PDB info PDB header:translation/rna Chain: I: PDB Molecule:translation initiation factor 2; PDBTitle: if2, if1, and trna fitted to cryo-em data of e. coli 70s2 initiation complex Resolution 13.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	A	T	A	G	H	V	D	H	G	K	T	T	L	L	Q	A	I	T	G	V	N	A	D	R	L	P	E	E	K	K	R	G	M	T	I	D	L	G	Y	A	Y	W	P	Q	P	D	G	R	V	P	G	F	I	D	V	P	G	H	E	K	F	L	S	N	M	L	A	G	V	G	G	I	D	H	A	L	L	V
Query Conservation
Alig confidence																									.	.	.																							.
Template Conservation																									.	.	.																							.
Template Sequence		V	V	T	I	M	G	H	V	D	H	G	K	T	S	L	L	E	Y	I	R	S	T	K	.	.	.	V	A	S	G	E	A	G	G	I	T	Q	H	I	G	A	Y	H	V	E	T	E	N	.	G	M	I	T	F	L	D	T	P	G	H	A	A	F	T	S	M	R	A	R	G	A	Q	A	T	D	I	V	V	L	V
Template Known Secondary structure								S	T	T	S	S	S												.	.	.		S	B	T	T	B							S	S						T	T	S	.	S									T	T	T			T	T	S	B		S	S	S	B	S		S	S
Template Predicted Secondary structure																									.	.	.																							.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.				.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.
Query SS confidence																																																				.	.
Query Sequence		V	A	C	D	D	G	V	M	A	Q	T	R	E	H	L	A	I	L	Q	L	T	G	N	P	M	L	T	V	A	L	T	K	A	D	R	V	D	E	A	R	V	D	E	V	E	R	Q	V	K	E	.	.	V	L	R	E	Y	G	F	A	E	A	K	L	F	I	T	A	A	T	E	G	R	G	M	D	A	L	R	E
Query Conservation																																																				.	.
Alig confidence																										.																.										.	.
Template Conservation																										.																.
Template Sequence		V	A	A	D	D	G	V	M	P	Q	T	I	E	A	I	Q	H	A	K	A	A	Q	V	P	.	V	V	V	A	V	N	K	I	D	K	P	E	A	D	P	.	D	R	V	K	N	E	L	S	Q	Y	G	I	L	P	E	E	W	G	G	E	S	Q	F	V	H	V	S	A	K	A	G	T	G	I	D	E	L	L	D
Template Known Secondary structure				T	T	T	B	S		T	T	T										T	T			.								S	S	S	S	T	T			.			T	T										T	T			S	S	S								T	T	T		T	T		T	T
Template Predicted Secondary structure																										.																.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.		.	330	.	.	.	.	.	.	.	.	.	340	.	.	.		.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
		160	.	.				.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure					.	.	.																																																													.
Query SS confidence					.	.	.																																																													.
Query Sequence		H	L	L	.	.	.	Q	L	P	E	R	E	H	A	S	Q	H	S	F	R	L	A	I	D	R	A	F	T	V	K	G	A	G	L	V	V	T	G	T	A	L	S	G	E	V	K	V	G	D	S	L	W	L	T	G	V	N	K	P	M	R	V	R	A	L	H	.	A	Q	N	Q	P	T	E	T	A	N	A	G	Q
Query Conservation					.	.	.																																																													.
Alig confidence					.	.	.																																																				.	.								.
Template Conservation																																																											.	.
Template Sequence		A	I	L	L	Q	A	E	V	L	E	L	K	A	V	R	K	G	M	A	S	G	A	V	I	E	S	F	L	D	K	G	R	G	P	V	A	T	V	L	V	R	E	G	T	L	H	K	G	D	I	V	L	C	G	F	E	Y	.	.	G	R	V	R	A	M	R	N	E	L	G	Q	E	V	L	E	A	G	P	S	I
Template Known Secondary structure			T	T	T	T				S	T	T	T	S				S	B												S	S	S	S										S	B			T	T							B	S	S	.	.									T	T	T	T	S							S	S
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.			440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
		236	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	A	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	E	I	L
Template Known Secondary structure			S	S	S
Template Predicted Secondary structure
Template SS confidence
		461	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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