Job Description P14081 Confidence 98.94% Date Thu Jan 5 11:33:54 GMT 2012 Rank 248 Aligned Residues 155 % Identity 19% Template c1zbdA_ PDB info PDB header:g protein Chain: A: PDB Molecule:rabphilin-3a; PDBTitle: structural basis of rab effector specificity: crystal2 structure of the small g protein rab3a complexed with the3 effector domain of rabphilin-3a Resolution 2.60 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		I	A	T	A	G	H	V	D	H	G	K	T	T	L	L	Q	A	I	T	G	V	N	A	D	R	L	P	E	E	K	K	R	G	M	T	I	D	L	G	Y	A	Y	W	P	Q	P	D	G	R	V	P	G	F	I	.	D	V	P	G	H	E	K	F	L	S	N	M	L	A	G	V	G	G	I	D	H	A	L	L	V
Query Conservation																																																								.
Alig confidence																								.	.	.																														.
Template Conservation																								.	.	.
Template Sequence		I	L	I	I	G	N	S	S	V	G	K	T	S	F	L	F	R	Y	A	D	D	S	.	.	.	F	T	P	A	F	V	S	T	V	G	I	D	F	K	V	K	T	I	Y	R	N	D	K	R	I	K	L	Q	I	W	D	T	A	G	L	E	R	Y	R	T	I	T	T	A	Y	Y	R	G	A	X	G	F	I	L	X
Template Known Secondary structure							S	T	T	S	S										T			.	.	.			S							S											T	T													S	G	G	G						T	T	G	G	G		S
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.
Query SS confidence																							.	.	.
Query Sequence		V	A	C	D	D	G	V	M	A	Q	T	R	E	H	L	A	I	L	Q	L	T	.	.	.	G	N	P	M	L	T	V	A	L	T	K	A	D	R	V	D	E	A	R	V	D	E	V	E	R	Q	V	K	E	V	L	R	E	Y	G	F	A	E	A	K	L	F	I	T	A	A	T	E	G	R	G	M	D	A	L	R
Query Conservation																							.	.	.
Alig confidence																							.	.	.																																		.	.	.	.	.
Template Conservation																																																											.	.	.	.	.
Template Sequence		Y	D	I	T	N	E	E	S	F	N	A	V	Q	D	W	S	T	Q	I	K	T	Y	S	W	D	N	A	Q	V	L	L	V	G	N	K	C	D	X	E	D	E	R	V	V	S	S	E	R	G	R	Q	L	A	D	H	L	G	.	.	.	.	.	F	E	F	F	E	A	S	A	K	D	N	I	N	V	K	Q	T	F
Template Known Secondary structure				T	T																			S		S	S										T	T		T	T	S			S													T	.	.	.	.	.							B	T	T	T	T	B	S	S
Template Predicted Secondary structure																																																											.	.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.						.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		159	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	L	L	Q	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	L	V	D	V	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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