Job Description P14081 Confidence 98.83% Date Thu Jan 5 11:33:54 GMT 2012 Rank 268 Aligned Residues 155 % Identity 14% Template c1z06A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:ras-related protein rab-33b; PDBTitle: gppnhp-bound rab33 gtpase Resolution 1.81 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																																			.	.
Query SS confidence																																																																			.	.
Query Sequence		I	A	T	A	G	H	V	D	H	G	K	T	T	L	L	Q	A	I	T	G	V	N	A	D	R	L	P	E	E	K	K	R	G	M	T	I	D	L	G	Y	A	Y	W	P	Q	P	D	G	R	V	P	G	F	I	D	V	P	G	H	E	K	F	L	S	N	.	.	M	L	A	G	V	G	G	I	D	H	A	L	L
Query Conservation																																																																			.	.
Alig confidence																								.	.	.																																									.	.
Template Conservation																								.	.	.
Template Sequence		I	I	V	I	G	D	S	N	V	G	K	T	C	L	T	Y	R	F	C	A	G	R	.	.	.	F	P	D	R	T	E	A	T	I	G	V	D	F	R	E	R	A	V	D	I	D	G	E	R	I	K	I	Q	L	W	D	T	A	G	Q	E	R	F	R	K	S	M	V	Q	H	Y	Y	R	N	V	H	A	V	V	F
Template Known Secondary structure								T	T	S	S											S	S	.	.	.			S	S						S											T	T													S					T	T	T						T	T
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		81	.	.	.	.	.	.					.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.
Query SS confidence									.	.	.	.
Query Sequence		V	V	A	C	D	D	G	.	.	.	.	V	M	A	Q	T	R	E	H	L	A	I	L	Q	L	T	G	N	P	M	L	T	V	A	L	T	K	A	D	R	V	D	E	A	R	V	D	E	V	E	R	Q	V	K	E	V	L	R	E	Y	G	F	A	E	A	K	L	F	I	T	A	A	T	E	G	R	G	M	D	A
Query Conservation									.	.	.	.
Alig confidence									.	.	.	.																														.	.																			.	.	.
Template Conservation																																										.	.																			.	.	.
Template Sequence		V	Y	D	M	T	N	M	A	S	F	H	S	L	P	A	W	I	E	E	C	K	Q	H	L	L	A	N	D	I	P	R	I	L	V	G	N	K	C	D	L	.	.	R	S	A	I	Q	V	P	T	D	L	A	Q	K	F	A	D	T	H	.	.	.	S	M	P	L	F	E	T	S	A	K	N	P	N	D	N	D	H
Template Known Secondary structure					T	T							T															S											T	T		.	.	G	G	G			S												T	.	.	.	T								S	S	S	G	G	G	G	S
Template Predicted Secondary structure																																										.	.																			.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170				.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	E	H	L	L	Q	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	A	I	F	M	T	L	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions