Job Description P14081 Confidence 99.89% Date Thu Jan 5 11:33:54 GMT 2012 Rank 56 Aligned Residues 151 % Identity 21% Template c1xzqA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable trna modification gtpase trme; PDBTitle: structure of the gtp-binding protein trme from thermotoga2 maritima complexed with 5-formyl-thf Resolution 2.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.										.	.	.	.	.	.	70	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.
Query Sequence		M	I	I	A	T	A	G	H	V	D	H	G	K	T	T	L	L	Q	A	I	T	G	V	N	A	D	R	L	P	E	E	K	K	R	G	M	T	I	D	L	G	Y	A	Y	W	P	Q	P	D	G	R	V	P	G	F	I	D	V	P	G	H	E	K	.	.	.	.	.	.	.	.	.	F	L	S	N	M	L	A	G
Query Conservation																																																																	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.																						.																.	.	.	.	.	.	.	.	.
Template Conservation																										.	.																						.
Template Sequence		L	R	M	V	I	V	G	K	P	N	V	G	K	S	T	L	L	N	R	L	L	N	E	D	.	.	R	A	I	V	T	D	I	P	G	T	T	R	D	V	I	S	E	E	I	V	I	.	R	G	I	L	F	R	I	V	D	T	A	G	V	R	S	E	T	N	D	L	V	E	R	L	G	I	E	R	T	L	Q	E
Template Known Secondary structure										T	T	G	G	G	S										T	.	.	B										S			S								.	T	T								S	S				S	S			S	S
Template Predicted Secondary structure																										.	.																						.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.			.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	G	I	D	H	A	L	L	V	V	A	C	D	D	G	V	M	A	Q	T	R	E	H	L	A	I	L	Q	L	T	G	N	P	M	L	T	V	A	L	T	K	A	D	R	V	D	E	A	R	V	D	E	V	E	R	Q	V	K	E	V	L	R	E	Y	G	F	A	E	A	K	L	F	I	T	A	A	T	E	G
Query Conservation
Alig confidence																																.	.	.																									.	.	.	.	.	.	.	.
Template Conservation																																.	.	.																									.	.	.	.	.	.	.	.
Template Sequence		I	E	K	A	D	I	V	L	F	V	L	D	A	S	S	P	L	D	E	E	D	R	K	I	L	E	R	I	K	N	.	.	.	K	R	Y	L	V	V	I	N	K	V	D	V	V	E	K	I	N	E	E	E	I	K	N	K	.	.	.	.	.	.	.	.	L	G	T	D	R	H	M	V	K	I	S	A	L	K	G
Template Known Secondary structure						S								S	S	S													G	G	G	.	.	.	S	S									S	S				S									.	.	.	.	.	.	.	.	T	S		S	T	T						T	T	T	T
Template Predicted Secondary structure																																.	.	.																									.	.	.	.	.	.	.	.
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.				.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.									.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	M	D	A	L	R	E	H	L	L	Q	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G	L	E	K	L	E	E	S	I	Y	R	E	T
Template Known Secondary structure															T
Template Predicted Secondary structure
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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