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Job DescriptionP14081
Confidence99.76%DateThu Jan 5 11:33:54 GMT 2012
Rank89Aligned Residues146
% Identity15%Templatec1t9hA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:probable gtpase engc; PDBTitle: the crystal structure of yloq, a circularly permuted gtpase.
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20... ......30.........40... ......50........ .60.........70.
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Query Sequence  HVDHGKTTLLQAITGV. . . . . . . . NADRLPEEKKRGMTIDLGYA. . . . . . . YWPQPDGRVPGFIDV. PGHEKFLSNMLAG
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Template Sequence  HMPEGK. . IIKALSGFYYVLDESEDSDKVIQCRGRGIFRKNKITPLVGDYVVYQAENDKEGYLMEIKERTNELIRPP. . .
Template Known Secondary structure  S

..TT
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BT


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TTTT...
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   0..... ....10.........20.........30.........40.........50.........60.........70....
 
   72.......80...... ...90.........100.........110.........120.........130.........140.........150
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Query Sequence  VGGIDHALLVVACDD. GVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFAEAKLFITAATE
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Template Sequence  ICNVDQAVLVFSAVQPSFSTALLDRFLVLVEANDIQPIICITKMDLIEDQDTEDTIQAYAEDYRNIGY. . . DVYLTSSKD
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TTT

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   75....80.........90.........100.........110.........120.........130.........140.. .......150.
 
   151........160.
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Query Sequence  GRGMDALREHL
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Template Sequence  QDSLADIIPHF
Template Known Secondary structure  TT
TTTGGGG
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   152.......160..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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