Job Description P14081 Confidence 100.00% Date Thu Jan 5 11:33:54 GMT 2012 Rank 17 Aligned Residues 330 % Identity 25% Template c1s0uA_ PDB info PDB header:translation Chain: A: PDB Molecule:translation initiation factor 2 gamma subunit; PDBTitle: eif2gamma apo Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.																.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	I	I	A	T	A	G	H	V	D	H	G	K	T	T	L	L	Q	A	I	T	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	D	R	L	P	E	E	K	K	R	G	M	T	I	D	L	G	Y	A	Y	W	P	Q	P	D	G	R	V	P	G	F	I	D	V	P	G	H	E	K	F	L
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	N	I	G	M	V	G	H	V	D	H	G	K	T	S	L	T	K	A	L	T	G	V	W	T	D	R	G	I	S	I	R	L	G	Y	A	D	C	E	I	R	K	C	P	Q	C	G	T	Y	T	T	K	P	R	C	P	N	C	L	A	E	T	E	F	L	R	R	V	S	F	V	D	S	P	G	H	E	T	L	M
Template Known Secondary structure								S		T	T	S	S										S																						T	T	T					S	S	S	B		T	T	S			B													S	S
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		S	N	M	L	A	G	V	G	G	I	D	H	A	L	L	V	V	A	C	D	D	G	V	.	M	A	Q	T	R	E	H	L	A	I	L	Q	L	T	G	N	P	M	L	T	V	A	L	T	K	A	D	R	V	D	E	A	R	V	D	E	V	E	R	Q	V	K	E	V	L	R	E	Y	G	F	A	E	A	K	L	F
Query Conservation																									.
Alig confidence																									.
Template Conservation
Template Sequence		A	T	M	L	S	G	A	S	L	M	D	G	A	I	L	V	I	A	A	N	E	P	C	P	Q	P	Q	T	K	E	H	L	M	A	L	E	I	L	G	I	D	K	I	I	I	V	Q	N	K	I	D	L	V	D	E	K	Q	A	E	E	N	Y	E	Q	I	K	E	F	V	K	G	T	I	A	E	N	A	P	I	I
Template Known Secondary structure						T	T		S			S								T	T	S		S	S														T	T											T	T	S	S		T	T	T	T	T	T										T	T	S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.										.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.																																												.
Query SS confidence																													.	.	.	.	.	.	.	.	.																																												.
Query Sequence		I	T	A	A	T	E	G	R	G	M	D	A	L	R	E	H	L	L	Q	L	P	E	R	E	H	A	S	.	.	.	.	.	.	.	.	.	Q	H	S	F	R	L	A	I	D	R	A	F	T	V	K	G	A	G	L	V	V	T	G	T	A	L	S	G	E	V	K	V	G	D	S	L	W	L	T	G	V	N	K	.
Query Conservation																													.	.	.	.	.	.	.	.	.																																												.
Alig confidence					.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.																																												.
Template Conservation					.	.	.	.	.	.
Template Sequence		P	I	N	.	.	.	.	.	.	I	D	V	L	L	K	A	I	Q	D	F	I	P	T	P	K	R	D	P	D	A	T	P	R	M	Y	V	A	R	S	F	D	I	N	K	P	G	T	E	I	K	D	L	K	G	G	V	L	G	G	A	I	I	Q	G	V	F	K	V	G	D	E	I	E	I	R	P	G	I	K	V
Template Known Secondary structure					.	.	.	.	.	.												S							T	T	S															S	S			G	G	G													S				T	T
Template Predicted Secondary structure					.	.	.	.	.	.
Template SS confidence
		205	.	.							.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
													215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.				.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.					.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																													.	.	.																							.	.	.	.											.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																													.	.	.																							.	.	.	.											.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	P	M	R	V	R	A	L	H	A	Q	N	Q	P	T	E	T	A	N	A	G	Q	R	I	A	L	N	I	A	.	.	.	G	D	A	E	K	E	Q	I	N	R	G	D	W	L	L	A	D	V	P	P	E	P	.	.	.	.	F	T	R	V	I	V	E	L	Q	T	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																													.	.	.																							.	.	.	.											.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																													.	.	.		.																					.	.	.	.											.	.
Template Conservation																																													.
Template Sequence		T	E	G	N	K	T	F	W	K	P	L	T	T	K	I	V	S	L	A	A	G	N	T	I	L	R	K	A	H	P	G	G	L	I	G	V	G	T	T	L	D	P	Y	.	L	T	K	S	D	A	L	T	G	S	V	V	G	L	P	G	T	L	P	P	I	R	E	K	I	T	I	R	A	N	L	L	D	R	V	V
Template Known Secondary structure				T	T																	T	T				S				S	S	S							S	S		G	G	.	G	T	G	G	G	T	T	T	T					S	T	T		S																		S
Template Predicted Secondary structure																																													.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
									275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.			.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																																																		.	.
Query SS confidence		.	.	.	.	.	.	.																																																		.	.
Query Sequence		.	.	.	.	.	.	.	H	T	P	L	T	Q	W	Q	P	L	H	I	H	H	A	A	S	H	V	T	G	R	V	S	L	L	E	D	N	L	A	E	L	V	F	D	T	P	L	W	L	A	D	N	D	R	L	V	L	.	.	R	D	I	S	A	R	N	T	L	A	G	A	R	V
Query Conservation		.	.	.	.	.	.	.																																																		.	.
Alig confidence		.	.	.	.	.	.	.																																																		.	.
Template Conservation
Template Sequence		G	T	K	E	E	L	K	I	E	P	L	R	T	G	E	V	L	M	L	N	I	G	T	A	T	T	A	G	V	I	T	S	A	R	G	D	I	A	D	I	K	L	K	L	P	I	C	A	E	I	G	D	R	V	A	I	S	R	R	V	G	S	R	W	R	L	I	G	Y	G	T	I
Template Known Secondary structure		S		S	S	T	T							T	T								T	T												T	T														T	T										S	S	S
Template Predicted Secondary structure
Template SS confidence
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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