Job Description P14081 Confidence 99.19% Date Thu Jan 5 11:33:54 GMT 2012 Rank 182 Aligned Residues 152 % Identity 14% Template c1m2oD_ PDB info PDB header:protein transport/signaling protein Chain: D: PDB Molecule:gtp-binding protein sar1; PDBTitle: crystal structure of the sec23-sar1 complex Resolution 2.50 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	T	A	G	H	V	D	H	G	K	T	T	L	L	Q	A	I	T	G	V	N	A	D	R	L	P	E	E	K	K	R	G	M	T	I	D	L	G	Y	A	Y	W	P	Q	P	D	G	R	V	P	G	F	I	D	V	P	G	H	E	K	F	L	S	N	M	L	A	G	V	G	G	I	D	H	A	L	L	V	V
Query Conservation
Alig confidence																									.	.	.	.	.	.																		.
Template Conservation																									.	.	.	.	.	.																		.
Template Sequence		L	L	F	L	G	L	D	N	A	G	K	T	T	L	L	H	M	L	K	N	D	R	L	.	.	.	.	.	.	A	T	L	Q	P	T	W	H	P	T	S	E	E	L	A	I	G	.	N	I	K	F	T	T	F	D	L	G	G	H	I	Q	A	R	R	L	W	K	D	Y	F	P	E	V	N	G	I	V	F	L	V
Template Known Secondary structure							S	T	T	S	S										T	S			.	.	.	.	.	.								S									S	.	S	S										S	S	G	G	G	G	T						T	T
Template Predicted Secondary structure																									.	.	.	.	.	.																		.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.							.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.					.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.
Query SS confidence																								.	.	.	.
Query Sequence		A	C	D	D	G	V	M	A	Q	T	R	E	H	L	A	I	L	Q	L	T	G	N	.	.	.	.	P	M	L	T	V	A	L	T	K	A	D	R	V	D	E	A	R	V	D	E	V	E	R	Q	V	K	E	V	L	R	E	Y	G	F	A	E	A	K	L	F	I	T	A	A	T	E	G	R	G	M	D	A	L	R
Query Conservation																								.	.	.	.
Alig confidence																								.	.	.	.																																		.	.
Template Conservation																																																													.	.
Template Sequence		D	A	A	D	P	E	R	F	D	E	A	R	V	E	L	D	A	L	F	N	I	A	E	L	K	D	V	P	F	V	I	L	G	N	K	I	D	A	P	N	A	V	S	E	A	E	L	R	S	A	L	G	L	L	N	T	T	G	R	.	.	P	V	E	V	F	M	C	S	V	V	M	R	N	G	Y	L	E	A	F
Template Known Secondary structure			T	T		G	G	G													T		G	G	G	T	T			B			B				T	T	S	T	T											T	T		S	S					.	.		B			B			B	T	T	T	T	B	S
Template Predicted Secondary structure																																																													.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		159	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	L	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	W	L	S	Q
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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