Job Description P14081 Confidence 100.00% Date Thu Jan 5 11:33:54 GMT 2012 Rank 5 Aligned Residues 337 % Identity 26% Template c1g7cA_ PDB info PDB header:translation Chain: A: PDB Molecule:elongation factor 1-alpha; PDBTitle: yeast eef1a:eef1ba in complex with gdpnp Resolution 2.05 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.																													.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	I	I	A	T	A	G	H	V	D	H	G	K	T	T	L	L	Q	A	I	T	G	V	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	R	L	P	E	E	K	K	R	G	M	T	I	D	L	G	Y	A	Y	W	P	Q	P	D	G	R	V
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Conservation																																																																															.
Template Sequence		I	N	V	V	V	I	G	H	V	D	S	G	K	S	T	T	T	G	H	L	I	Y	K	C	G	G	I	D	K	R	T	I	E	K	F	E	K	E	A	A	E	L	G	K	G	S	F	K	Y	A	W	V	L	D	K	L	K	A	E	R	E	R	G	I	T	I	D	I	A	L	W	K	F	E	T	P	K	.	Y	Q
Template Known Secondary structure										T	T	S														S		S	S											G	G	G	G	S	S	S																		T				S		S							S	S	.
Template Predicted Secondary structure																																																																															.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90								.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.																												.	.
Query SS confidence																																								.	.	.	.	.	.	.																												.	.
Query Sequence		P	G	F	I	D	V	P	G	H	E	K	F	L	S	N	M	L	A	G	V	G	G	I	D	H	A	L	L	V	V	A	C	D	D	G	V	M	A	.	.	.	.	.	.	.	Q	T	R	E	H	L	A	I	L	Q	L	T	G	N	P	M	L	T	V	A	L	T	K	A	D	R	V	.	.	D	E	A	R	V	D
Query Conservation																																								.	.	.	.	.	.	.																												.	.
Alig confidence																																								.	.	.	.	.	.	.																												.	.
Template Conservation
Template Sequence		V	T	V	I	D	A	P	G	H	R	D	F	I	K	N	M	I	T	G	T	S	Q	A	D	C	A	I	L	I	I	A	G	G	V	G	E	F	E	A	G	I	S	K	D	G	Q	T	R	E	H	A	L	L	A	F	T	L	G	V	R	Q	L	I	V	A	V	N	K	M	D	S	V	K	W	D	E	S	R	F	Q
Template Known Secondary structure											T	T								S	S	S			S									S								T		T	T													T	T											T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.																									.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	V	E	R	Q	V	K	E	V	L	R	E	Y	G	F	.	.	A	E	A	K	L	F	I	T	A	A	T	E	G	R	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	L	R	E	H	L	L	Q	L	P	E	R	E	H	A	S	Q	H	S	F	R	L
Query Conservation																	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	I	V	K	E	T	S	N	F	I	K	K	V	G	Y	N	P	K	T	V	P	F	V	P	I	S	G	W	N	G	D	N	M	I	E	A	T	T	N	A	P	W	Y	K	G	W	E	K	E	T	K	A	G	V	V	K	G	K	T	L	L	E	A	I	D	A	I	E	Q	P	S	R	P	T	D	K	P	L	R	L
Template Known Secondary structure															T			G	G	G								T	T	T		B	T	T	T	B			S	S		T	T									S	S						S	S							T	S						G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	D	R	A	F	T	V	K	G	A	G	L	V	V	T	G	T	A	L	S	G	E	V	K	V	G	D	S	L	W	L	T	G	V	N	K	P	M	R	V	R	A	L	H	A	Q	N	Q	P	T	E	T	A	N	A	G	Q	R	I	A	L	N	I	A	G	D	A	E	K	E	Q	I	N	R	G	D	W	L	L
Query Conservation
Alig confidence																																																																				.
Template Conservation																																																																				.
Template Sequence		P	L	Q	D	V	Y	K	I	G	G	I	G	T	V	P	V	G	R	V	E	T	G	V	I	K	P	G	M	V	V	T	F	A	P	A	G	V	T	T	E	V	K	S	V	E	M	H	H	E	Q	L	E	Q	G	V	P	G	D	N	V	G	F	N	V	K	N	.	V	S	V	K	E	I	R	R	G	N	V	C	G
Template Known Secondary structure										T	T	T										B	S		B		T	T							T	T	T											T	T				S		B		T	T								S	S	.			G	G	G	S		T	T
Template Predicted Secondary structure																																																																				.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.		.	.	.	.	.	.	.	320	.	.	.	.	.
		258	.	260	.	.	.	.						.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300																							.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure									.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	V	P	P	E	P	.	.	.	.	.	F	T	R	V	I	V	E	L	Q	T	H	T	P	L	T	Q	W	Q	P	L	H	I	H	H	A	A	S	H	V	T	G	R	V	S	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	N	L	A	E	L	V	F	D
Query Conservation									.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	K	N	D	P	P	K	G	C	A	S	F	N	A	T	V	I	V	L	N	H	P	G	Q	I	S	A	G	Y	S	P	V	L	D	C	H	T	A	H	I	A	C	R	F	D	E	L	L	E	K	N	D	R	R	S	G	K	K	L	E	D	H	P	K	F	L	K	S	G	D	A	A	L	V	K	F	V	P	S
Template Known Secondary structure			T	T	S	S																S		S			B		T	T								T	T																T	T	T							S		S		B		T	T										S
Template Predicted Secondary structure
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
		311	.	.	.	.	.	.	.	.							320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure											.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.
Query Sequence		T	P	L	W	L	A	D	N	D	.	.	.	.	.	.	R	L	V	L	R	D	I	S	A	R	N	T	L	A	G	A	R	V	V	M	L	N
Query Conservation											.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.									.	.
Template Conservation																									.	.
Template Sequence		K	P	M	C	V	E	A	F	S	E	Y	P	P	L	G	R	F	A	V	R	D	M	R	.	.	Q	T	V	A	V	G	V	I	K	S	V	D
Template Known Secondary structure		S							T	T	T		G	G	G	S							T	T	.	.
Template Predicted Secondary structure																									.	.
Template SS confidence
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.			.	430	.	.	.	.	.	.	.	.	.	440