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Job DescriptionP0A6K6
Confidence99.22%DateWed Jan 25 15:20:15 GMT 2012
Rank32Aligned Residues294
% Identity20%Templatec3a52A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:cold-active alkaline phosphatase; PDBTitle: crystal structure of cold-active alkailne phosphatase from2 psychrophile shewanella sp.
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  RAFIMVLDSFGIGATEDAERFGDVGADTLGHIAEACAKGEADNGRKGPLNLPNLTRLGLAKAHEGSTGFIPAGMDGNAEV
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Template Sequence  GMIIMVGDGMGPAYTSAYRYFQDNP. . . . . . . . . . . . . . . . . . . DTEEIEQTVFDRLL. VGMASTYPARESGYVTDSAAS
Template Known Secondary structure  TT



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   2.......10.........20...... ...30.........40 .........50.........60.
 
   83......90.........100.........110.........120.........130.........140.......
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Query Sequence  IGAYAWAHEMSSGKDTPSGHWEIAGVPVLFEWGYFSDHENSFPQELLDKLVERANLPGYLGNCHS. . . . . . . . . . . . . . .
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Template Sequence  ATA. . . . . . . . . . . . . . . . . . . LATGFKSYNGAIAVDINKRPLTTIMQMAKARGMSTGVAVTAQVNHATPAAFLTHNESR
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TT
BSB
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B


TT
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BS
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   62.. .....70.........80.........90.........100.........110.........120..
 
   148.150.........160.........170.........180.........190.........200.........210.........220...
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Query Sequence  . . . . SGTVILDQLGEEHMKTGKPIFYTSADSVFQIACHEETFGLDKLYELCEIAREELTNGGYNIGRVIARPFIGDKAGN
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Template Sequence  KNYEAIAADMLKSDADVILGGGRKYF. . . . . . . . . . . . . . . . . SEALVSQFSA. . . . . . . . . . . . . . . . . . . . . . . KGYQ
Template Known Secondary structure  T
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   123......130.........140........ .150........ .160..
 
   224.....230.........240.........250.........260.........270.........280.........290.........300...
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Query Sequence  FQRTGNRHDLAVEPPAPTVLQKLVDEKHGQVVSVGKIADIYANCGITKKVKATGLDALFDATIKEMKEAGDNTIVFTNFV
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Template Sequence  HITELAQLDSITQPK. . . . VLGLFAEVQLPWVIDD. . . . . . . . . . . . . . TDANTLSKLTQKSLDLLSQNEKGFVLLVEGS
Template Known Secondary structure 
SGGGGGG

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   163......170....... ..180.........190... ......200.........210.........220....
 
   304.....310.........320.........330....... ..340.........350
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Query Sequence  DFDSSWGHRRDVAGYAAGLELFDRRLPELMSLLR. . DDDILILTADHGC. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  LIDWA. GHNNDIATAMAEMQGFANAIEVVEQYIRQHPDTLLVVTADHNTGGLSIGANGEYQWDTKLPKGISASPASIATH
Template Known Secondary structure  .TT


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   225.... 230.........240.........250.........260.........270.........280.........290.........300...
 
   351........360.........370.........380
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DPTWTGTDHTREHIPVLVYGPKVKPGSLGH
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Template Sequence  AIAADDWQAGVNQQLGFDVNSTELQQLTNARMQGKSTLEVALKKIIDTRSYTGWTTSGHTGVDVQVFAMGPA. . ADLFKG
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SS
TS



T
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   304.....310.........320.........330.........340.........350.........360.........370..... ....380.
 
   381........390......
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Query Sequence  RETFADIGQTLAKYFG
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Template Sequence  NQDNTHIAEKMMSLLP
Template Known Secondary structure  TS
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   382.......390.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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