Job Description P0A6K6 Confidence 100.00% Date Wed Jan 25 15:20:15 GMT 2012 Rank 13 Aligned Residues 277 % Identity 14% Template c2w8dB_ PDB info PDB header:transferase Chain: B: PDB Molecule:processed glycerol phosphate lipoteichoic acid synthase 2; PDBTitle: distinct and essential morphogenic functions for wall- and2 lipo-teichoic acids in bacillus subtilis Resolution 2.35 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																																					.	.													.
Query SS confidence																																					.	.													.
Query Sequence		V	G	A	D	T	L	G	H	I	A	E	A	C	A	K	G	E	A	D	N	G	R	K	G	P	L	N	L	P	N	L	T	R	L	G	.	.	L	A	K	A	H	E	G	S	T	G	F	I	.	P	A	G	M	D	G	N	A	E	V	I	G	A	Y	A	W	A	H	E	M	S	S	G	K	D	T	P	S	G	H
Query Conservation																																					.	.													.
Alig confidence																																					.	.													.												.
Template Conservation																																																															.
Template Sequence		E	G	K	N	V	I	Y	V	S	L	E	S	L	Q	S	F	I	I	D	Y	K	I	D	G	K	E	V	T	P	F	L	N	K	L	A	H	D	N	E	T	F	Y	F	D	N	F	F	H	Q	T	G	Q	G	K	S	D	A	E	F	X	X	.	E	N	S	L	Y	P	L	A	Q	G	S	V	F	V	N	K	A	Q
Template Known Secondary structure		T	T									T	T			G	G	G	T	T				T	T			S	S									S	S	S	S				S	S							T	T									.								S	S	S							T	T
Template Predicted Secondary structure																																																															.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.		.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150				.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.
Query SS confidence																																																		.	.	.
Query Sequence		W	E	I	A	G	V	P	V	L	F	E	W	G	Y	F	S	D	H	E	N	S	F	P	Q	E	L	L	D	K	L	V	E	R	A	N	L	P	G	Y	L	G	N	C	H	S	S	G	T	.	.	.	V	I	L	D	Q	L	G	E	E	H	M	K	T	G	K	P	I	F	Y	T	S	A	D	S	V	F	Q	I	A
Query Conservation																																																		.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.																	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.
Template Sequence		N	T	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	P	A	I	L	K	S	K	N	Y	T	S	A	T	F	H	G	N	T	Q	T	F	W	N	R	N	E	X	Y	K	A	E	G	I	D	K	F	F	D	S	A	Y	.	.	Y	D	X	N	E	E	N	T	K	N	Y
Template Known Secondary structure		S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						G	G	G	G	T								S	S		T	T	G	G	G									T							G	G	G	.	.	S				T	T	T	B		S	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.
Template SS confidence
		323	.	.	.																					.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.			370	.	.	.	.	.	.	.	.	.	380
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	H	E	E	T	F	G	L	D	K	L	Y	E	L	C	E	I	A	R	E	E	L	T	N	G	G	Y	N	I	G	R	V	I	A	R	P	F	I	G	D	K	A	G	N	F	Q	R	T	G	N	R	H	D	L	A	V	E	P	P	A	P	T	V	L	Q	K	L	V	D	E	K	H	G	Q	V	V	S	V	G	K
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	X	K	D	K	P	F	F	K	E	S	X	P	L	L	E	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	Q	P	F	Y	T	K	F	I	T	L	S	N	H	F	P	F	G	X	D	E	G
Template Known Secondary structure		S	B															T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		S	S									S	S		T	T					B	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.																																									.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		I	A	D	I	Y	A	N	C	G	I	T	K	K	V	K	A	T	G	L	D	A	L	F	D	A	T	I	K	E	M	K	E	A	G	D	N	T	I	V	F	T	N	F	V	D	F	D	S	S	W	G	H	R	R	D	V	A	G	Y	A	A	G	L	E	L	F	D	R	R	L	P	E	L	M	S	L	L	R	.	.
Query Conservation																																																																																.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	T	D	F	P	A	G	D	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	V	V	D	N	Y	F	Q	S	A	H	Y	L	D	Q	S	I	E	Q	F	F	N	D	L	K	K	D
Template Known Secondary structure		T	B							S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		421	.	.	.	.	.	.	.	.	430																																											.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
					338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.																.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	D	D	D	I	L	I	L	T	A	D	H	G	C	D	P	T	W	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	H	T	R	E	H	I	P	V	L	V	Y	G	P	K	V	K	P	G	S	L	G	H	R	E	T	F	A	D	I	G	Q	T	L	A	K	Y	F	G	T	S	D
Query Conservation		.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	Y	D	K	S	I	I	V	X	Y	G	D	H	Y	G	I	S	E	N	H	N	K	A	X	A	K	V	L	G	K	D	E	I	T	D	Y	D	N	A	Q	L	Q	R	V	P	L	F	I	H	A	A	G	V	K	G	E	K	V	H	K	Y	A	G	D	V	D	V	A	P	T	I	L	H	L	L	G	V	D	T
Template Known Secondary structure		S		G	G	G									S		S	S		G	G	G								T	T	S	S										T	T	B								T	T	S							S				G	G	G									T	T
Template Predicted Secondary structure
Template SS confidence
		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
		400	.	.				.	.	.	.	.
Predicted Secondary structure					.	.	.
Query SS confidence					.	.	.
Query Sequence		M	E	Y	.	.	.	G	K	A	M	F
Query Conservation					.	.	.
Alig confidence					.	.	.
Template Conservation
Template Sequence		K	D	Y	L	X	S	G	S	D	I	L
Template Known Secondary structure		T	T	S							T	T
Template Predicted Secondary structure
Template SS confidence
		539	540	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions