Return to main results Retrieve Phyre Job Id

Job DescriptionP23878
Confidence99.88%DateThu Jan 5 11:40:17 GMT 2012
Rank63Aligned Residues160
% Identity11%Templatec2j41A_
PDB info PDB header:transferaseChain: A: PDB Molecule:guanylate kinase; PDBTitle: crystal structure of staphylococcus aureus guanylate2 monophosphate kinase
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.........70.........80.........90.........100.........110
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Query Sequence  PDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQ
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Template Sequence  EKGLLIVLSGPSGVGKGTVRKRIFEDPSTSYKYSISMTTR. . . QMREGEVDGVDYFFKTRDAFEALIKDDQFIEYAEYVG
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STTS

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BTTTB

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TT
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   4.....10.........20.........30.........40... ......50.........60.........70.........80
 
   111........120.........130.........140.........150.........160.........170.........180.........190
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Query Sequence  PLFTRWRKEDEEAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELN
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Template Sequence  NYYGTPVQY. . . . . . . . . . . . . VKDTMDEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSKEVE. . . . . . . . . . . . . . .
Template Known Secondary structure  .............TT


GGG
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   81........ 90.........100.........110.........120.........130..
 
   191........200.........210.........220.
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Query Sequence  REKGYTLAAVLHDLNQACRYASHLIALREGK
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Template Sequence  MMNLYDYVVVNDEVELAKNRIQCIVEAEHLK
Template Known Secondary structure  GGGG
S
SST
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   160.........170.........180.........190
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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