Job Description P23878 Confidence 100.00% Date Thu Jan 5 11:40:17 GMT 2012 Rank 11 Aligned Residues 226 % Identity 26% Template c2d62A_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:multiple sugar-binding transport atp-binding PDBTitle: crystal structure of multiple sugar binding transport atp-2 binding protein Resolution 2.10 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.					80	.
Predicted Secondary structure																																																																												.	.	.	.
Query SS confidence																																																																												.	.	.	.
Query Sequence		A	R	L	R	G	E	Q	L	T	L	G	Y	G	K	Y	T	V	A	E	N	L	T	V	E	I	P	D	G	H	F	T	A	I	I	G	P	N	G	C	G	K	S	T	L	L	R	T	L	S	R	L	M	T	P	A	H	G	H	V	W	L	D	G	E	H	I	Q	H	Y	A	S	K	E	V	.	.	.	.	A	R
Query Conservation																																																																												.	.	.	.
Alig confidence																																																																												.	.	.	.
Template Conservation
Template Sequence		A	E	V	K	L	I	N	I	W	K	R	F	G	D	V	T	A	V	K	D	L	S	L	E	I	K	D	G	E	F	L	V	L	L	G	P	S	G	C	G	K	T	T	T	L	R	X	I	A	G	L	E	E	P	T	R	G	Q	I	Y	I	E	D	N	L	V	A	D	P	E	K	G	V	F	V	P	P	K	E	R
Template Known Secondary structure			S											T	T													T	T								S	T	T	S	S										T	S	S			S							T	T						G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	G	L	L	A	Q	N	A	T	T	P	G	D	I	T	V	Q	E	L	V	A	R	G	R	Y	P	H	Q	P	L	F	T	R	W	R	K	E	D	E	E	A	V	T	K	A	M	Q	A	T	G	I	T	H	L	A	D	Q	S	V	D	T	L	S	G	G	Q	R	Q	R	A	W	I	A	M	V	L	A	Q	E
Query Conservation
Alig confidence																														.	.	.	.
Template Conservation																														.	.	.	.
Template Sequence		D	V	A	X	V	F	Q	S	Y	A	L	Y	P	H	X	T	V	Y	D	N	I	A	F	P	L	K	L	R	.	.	.	.	K	V	P	K	Q	E	I	D	K	R	V	R	E	V	A	E	X	L	G	L	T	E	L	L	N	R	K	P	R	E	L	S	G	G	Q	R	Q	R	V	A	L	G	R	A	I	I	R	R
Template Known Secondary structure		T							S					T	T	S												T	T	.	.	.	.	T																	T	T		G	G	G	T	T			G	G	G	S															S	S
Template Predicted Secondary structure																														.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	I	M	L	L	D	E	P	T	T	W	L	D	I	S	H	Q	I	D	L	L	E	L	L	S	E	L	N	R	E	K	G	Y	T	L	A	A	V	L	H	D	L	N	Q	A	C	R	Y	A	S	H	L	I	A	L	R	E	G	K	I	V	A	Q	G	A	P	K	E	I	V	T	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	K	V	F	L	X	D	E	P	L	S	N	L	D	A	K	L	R	V	K	X	R	A	E	L	K	K	L	Q	R	Q	L	G	V	T	T	I	Y	V	T	H	D	Q	V	E	A	X	T	X	G	D	R	I	A	V	X	N	K	G	E	L	Q	Q	V	G	T	P	D	E	V	Y	Y	K	P
Template Known Secondary structure			S						S	T	T	T	T																					T								S										S							T	T														S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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