Job Description P23878 Confidence 98.58% Date Thu Jan 5 11:40:17 GMT 2012 Rank 87 Aligned Residues 162 % Identity 12% Template c1wxqA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:gtp-binding protein; PDBTitle: crystal structure of gtp binding protein from pyrococcus horikoshii2 ot3 Resolution 2.60 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.																		.	.	.	60	.	.	.	.	.	.	.	.	.	70													.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	A	I	I	G	P	N	G	C	G	K	S	T	L	L	R	T	L	S	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	T	P	A	H	G	H	V	W	L	D	G	E	H	.	.	.	.	.	.	.	.	.	.	.	.	I	Q	H	Y	A	S	K	E	V	A	R	R	I	G	L	L
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	G	V	V	G	K	P	N	V	G	K	S	T	F	F	S	A	A	T	L	A	N	V	G	V	T	Y	A	I	T	D	H	P	C	K	E	L	G	C	S	P	N	P	Q	N	Y	E	Y	R	N	G	L	A	L	I	P	V	K	X	V	D	V	A	F	L	D	D	L	R	X	A	S	A	L	I	H	V	V	D	A
Template Known Secondary structure								T	T	S	S																							S		S	S	S			S				S	S	S				T	T																S	S	T	T		S								T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		87	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure												.																																						.
Query SS confidence												.																																						.
Query Sequence		A	Q	N	A	T	T	P	G	D	I	.	T	V	Q	E	L	V	A	R	G	R	Y	P	H	Q	P	L	F	T	R	W	R	K	E	D	E	E	A	V	T	K	A	M	Q	A	T	G	I	.	T	H	L	A	D	Q	S	V	D	T	L	S	G	G	Q	R	Q	R	A	W	I	A	M	V	L	A	Q	E	T	A	I
Query Conservation												.																																						.
Alig confidence												.																																						.
Template Conservation
Template Sequence		T	G	K	T	D	P	E	G	Q	P	T	D	Y	H	D	P	V	E	D	I	E	F	L	E	R	E	I	D	Y	W	I	Y	G	I	L	S	K	G	W	D	K	F	A	K	R	I	K	L	Q	K	I	K	L	E	S	A	I	A	E	H	L	S	G	I	G	V	N	E	N	D	V	W	E	A	X	H	K	L	N	L
Template Known Secondary structure		T			B		T	T	S		B		S																									T	T	T					S	T	T	T	S	S												T	G	G	G	T													T	T
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	L	D	E	P	T	T	W	L	D	I	S	H	Q	I	D	L	L	E	L	L	S	E	L	N	R	E	K	G	Y	T	L	A	A	V	L	H	D
Query Conservation
Alig confidence										.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.
Template Sequence		P	E	D	P	T	K	W	S	.	.	.	.	.	.	Q	D	D	L	L	A	F	A	S	E	I	R	R	V	N	K	P	X	V	I	A	A	N	K	A
Template Known Secondary structure			S		G	G	G			.	.	.	.	.	.																S									G
Template Predicted Secondary structure										.	.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.							200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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