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Job DescriptionP23878
Confidence99.46%DateThu Jan 5 11:40:17 GMT 2012
Rank76Aligned Residues159
% Identity14%Templatec1u9iA_
PDB info PDB header:circadian clock proteinChain: A: PDB Molecule:kaic; PDBTitle: crystal structure of circadian clock protein kaic with phosphorylation2 sites
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  IPDGHFTAIIGPNGCGKSTLLRTLSRL. MTPAHGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDITVQELVARGRYP
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Template Sequence  LPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLA. . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTSSTTSS


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Query Sequence  HQPLFTRWRKEDEEAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWL. . . . DISHQIDLLE
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Template Sequence  . . . . . . . . . . KLVDEGKLFILDASPDPEGQEVVGGFDLSALIERINYAIQKYRARRVSIDSVTSVFQQYDASSVVRRELF
Template Known Secondary structure  ..........TTS



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   96...100.........110.........120.........130.........140.........150.........160.....
 
   185....190.........200...... ...210........
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Query Sequence  LLSELNREKGYTLAAVLHDLNQ. . . . . . . . . ACRYASHLIALR
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Template Sequence  RLVARLKQIGATTVMTTERIEEYGPIARYGVEEFVSDNVVILR
Template Known Secondary structure  T

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Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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