Return to main results Retrieve Phyre Job Id

Job DescriptionP27238
Confidence31.94%DateThu Jan 5 11:43:18 GMT 2012
Rank72Aligned Residues74
% Identity18%Templated3deua1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20..... ....30.........40.........50.........60.........70.........80.....
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Query Sequence  TTEELAECLGVAKQTVN. . . RWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNTPAFHNTPMLMEAEERIAEYAPGA
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Template Sequence  SQIQLAKAIGIEQPSLVRTLDQLEDKGLISRQKR. . . . . . . . . IKLTEKAEPLIAEM. . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TS
TTS

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   4950.........60.........70.........80.. .......90......
 
   86...90.........100.........110....
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Query Sequence  RAPAYRQIINAIDNMTDIEQEKVAQFLSR
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Template Sequence  EEVIHKTRGEILAGISSEEIELLIKLIAK
Template Known Secondary structure  TT

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   105....110.........120.........130...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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