Job Description P27238 Confidence 83.18% Date Thu Jan 5 11:43:18 GMT 2012 Rank 6 Aligned Residues 83 % Identity 12% Template d3broa1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators Resolution 2.04

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		M	T	T	E	E	L	A	E	C	L	G	V	A	K	Q	T	V	N	.	.	.	R	W	I	R	E	K	G	W	K	T	E	K	F	P	G	V	K	G	G	R	A	R	L	I	L	V	D	T	Q	V	C	E	F	I	Q	N	T	P	A	F	H	N	T	P	M	L	M	E	A	E	E	R	I	A	E	Y	A	P	G
Query Conservation																				.	.	.
Alig confidence																				.	.	.													.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	Q	R	D	L	E	S	E	F	S	I	K	S	S	T	A	T	V	L	L	Q	R	X	E	I	K	K	L	L	Y	R	K	.	V	S	G	K	D	S	R	Q	K	C	L	K	L	T	K	K	A	N	K	L	E	T	I	I	L	S	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			B									T																T	T	S					.			S	S		T	T	S											T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																			.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	A	P	A	Y	R	Q	I	I	N	A	I	D	N	M	T	D	I	E	Q	E	K	V	A	Q	F	L	S	R
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	X	D	S	D	Q	S	Q	X	T	S	G	L	N	K	E	E	V	V	F	L	E	K	I	L	K	R
Template Known Secondary structure		.	.	.	.									T	T	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions