 |
Job Description | P27238 | Confidence | 29.77% | Date | Thu Jan 5 11:43:18 GMT 2012 |
Rank | 79 | Aligned Residues | 23 |
% Identity | 30% | Template | d2bgca1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| CAP C-terminal domain-like
|
Resolution | 2.3 |
|
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | |
20 | . | . | . | . | . | . | . | . | . | 30 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | T | T | E | E | L | A | E | C | L | G | V | . |
A | K | Q | T | V | N | R | W | I | R | E |
Query Conservation |   |
  |
|
|   |
|
|
|   |
|   |
|
| . |   |   |   |   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|
|
|   |   |
|
|   |   |
|
|
|
|
|
|
|   |
|   |   |
Template Sequence |   |
L | T | M | Q | E | L | G | Y | S | S | G | I | A | H | S | S | A | V | S | R | I | I | S | K |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
169 | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|