Return to main results Retrieve Phyre Job Id

Job DescriptionP27238
Confidence29.77%DateThu Jan 5 11:43:18 GMT 2012
Rank79Aligned Residues23
% Identity30%Templated2bgca1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain CAP C-terminal domain-like
Resolution2.3

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10......... 20.........30
Predicted Secondary structure 






.
Query SS confidence 











.










Query Sequence  MTTEELAECLGV. AKQTVNRWIRE
Query Conservation   

 


 
 

.    
   
  
Alig confidence 











.










Template Conservation 

  


  

  






 
  
Template Sequence  LTMQELGYSSGIAHSSAVSRIISK
Template Known Secondary structure 

TT


Template Predicted Secondary structure 





Template SS confidence 























   169170.........180.........190..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions