Return to main results Retrieve Phyre Job Id

Job DescriptionP27238
Confidence37.72%DateThu Jan 5 11:43:18 GMT 2012
Rank62Aligned Residues34
% Identity26%Templated1ft9a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain CAP C-terminal domain-like
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20..... ....30.........40.
Predicted Secondary structure 







...




Query SS confidence 

















. . .















Query Sequence  MTTEELAECLGVAKQTVN. . . RWIREKGWKTEKFPGV
Query Conservation   

 


 
 

    
 ...  
  


  
 
 
 
Alig confidence 

















...















Template Conservation 

   

  

 






 
  
   
 
    
  
Template Sequence  FTVEEIANLIGSSRQTTSTALNSLIKEGYISRQGRGH
Template Known Secondary structure 


S
TTSS
STT
Template Predicted Secondary structure 











Template SS confidence 




































   164.....170.........180.........190.........200
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions