Return to main results Retrieve Phyre Job Id

Job DescriptionP27238
Confidence32.13%DateThu Jan 5 11:43:18 GMT 2012
Rank71Aligned Residues75
% Identity16%Templatec3lisB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:csp231i c protein; PDBTitle: crystal structure of the restriction-modification controller protein2 c.csp231i (monoclinic form)
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20. ........30.........40.........50.........60.........70.........80...
Predicted Secondary structure 







....




























Query SS confidence 













. . . .





























































Query Sequence  MTTEELAECLGVAK. . . . QTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNTPAFHNTPMLMEAEERIAEYAP
Query Conservation   

 


 
 

  ....  
   
  


  
 
 
  

            

   

   
        
  
  
 
Alig confidence 













....





.............................


























Template Conservation 


 


  


    
 
 

  .............................
 
   

   
  

  
 
    
 
Template Sequence  ISQEKLGVLAGIDEASASARMNQY. . . . . . . . . . . . . . . . . . . . . . . . . . . . . EKGKHAPDFEMANRLAKVLKIPVSYLY
Template Known Secondary structure 

TT

.............................TSS


TTS
GGGGG
Template Predicted Secondary structure 




.............................







Template SS confidence 















































































   15....20.........30........ .40.........50.........60.....
 
   84.....90.........100.........110..
Predicted Secondary structure 





Query SS confidence 




























Query Sequence  GARAPAYRQIINAIDNMTDIEQEKVAQFL
Query Conservation      
           

  

 

  

Alig confidence 








.


















Template Conservation         
 .      
       
   
Template Sequence  TPEDDLAQI. ILTWNELNEQERKRINFYI
Template Known Secondary structure 


.TT

Template Predicted Secondary structure 


.

Template SS confidence 




























   66...70.... .....80.........90...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions