Job Description P27238 Confidence 83.51% Date Thu Jan 5 11:43:18 GMT 2012 Rank 4 Aligned Residues 82 % Identity 23% Template c2nnnB_ PDB info PDB header:transcription Chain: B: PDB Molecule:probable transcriptional regulator; PDBTitle: crystal structure of probable transcriptional regulator from2 pseudomonas aeruginosa Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		T	T	E	E	L	A	E	C	L	G	V	A	K	Q	T	V	N	R	W	I	R	E	.	.	.	K	G	W	K	T	E	K	F	P	G	V	K	G	G	R	A	R	L	I	L	V	D	T	Q	V	C	E	F	I	Q	N	T	P	A	F	H	N	T	P	M	L	M	E	A	E	E	R	I	A	E	Y	A	P	G	A
Query Conservation																								.	.	.
Alig confidence																								.	.	.										.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	Q	N	Q	L	G	R	L	T	A	X	D	A	A	T	I	K	G	V	V	E	R	L	D	K	R	G	L	I	Q	R	S	A	D	.	P	D	D	G	R	R	L	L	V	S	L	S	P	A	G	R	A	E	L	E	A	G	L	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										T	T																T	T								.	T	T																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	P	A	Y	R	Q	I	I	N	A	I	D	N	M	T	D	I	E	Q	E	K	V	A	Q	F	L	S	R
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	A	R	E	I	N	R	Q	A	L	A	P	L	S	L	Q	E	Q	E	T	L	R	G	L	L	A	R
Template Known Secondary structure		.	.	.										T	T	S														T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions