 |
Job Description | P27238 | Confidence | 28.23% | Date | Thu Jan 5 11:43:18 GMT 2012 |
Rank | 89 | Aligned Residues | 52 |
% Identity | 17% | Template | c1r22B_ |
PDB info |
PDB header:transcription repressor | Chain: B: PDB Molecule:transcriptional repressor smtb; |
PDBTitle: crystal structure of the cyanobacterial metallothionein2 repressor smtb (c14s/c61s/c121s mutant) in the zn2alpha5-3 form
|
Resolution | 2.30 Å |
|
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | |
|
|
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  | . | . | . |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | T | T | E | E | L | A | E | C | L | G | V | A | K | Q | T | V | N | . |
. |
. |
R | W | I | R | E | K | G | W | K | T | E | K | F | P | G | V | K | G | G | R | A | R | L | I | L | V | D | T | Q | V | C | E | F | I | Q | N | T | P |
Query Conservation |   |
  |
|
|   |
|
|
|   |
|   |
|
|   |   |   |   |
|   | . | . | . |   |   |
|   |   |
|
|
|   |   |
|   |
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|
|
|   |   |
|   |
|
|   |
|
|
|
|   |
|
|   |   |
|   |   |   |
|
|
|   |   |   |
|   | . | . | . | . |
|   |   |   |   |
|   |
|   |   |   |   |
|   |   |
|   |   |   |   |
Template Sequence |   |
L | S | V | G | D | L | A | Q | A | I | G | V | S | E | S | A | V | S | H | Q | L | R | S | L | R | N | L | R | L | V | S | Y | R | K | Q | . |
. |
. |
. |
G | R | H | V | Y | Y | Q | L | Q | D | H | H | I | V | A | L | Y | Q | N | A |
Template Known Secondary structure |   |
B |
|  |  |  |  |  |  |  |  | T | S |
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  | . | . | . | . | T | T |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  | . | . | . | . |
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | |
|
|
|
. | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|