Job Description P0ACU7 Confidence 99.78% Date Thu Jan 5 11:19:05 GMT 2012 Rank 81 Aligned Residues 176 % Identity 9% Template c3qkxB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:uncharacterized hth-type transcriptional regulator hi_0893; PDBTitle: crystal structure of a tetr-family transcriptional regulator (hi0893)2 from haemophilus influenzae rd at 2.35 a resolution Resolution 2.35 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	E	D	V	L	G	E	A	L	K	L	L	E	L	Q	G	I	A	N	T	T	L	E	M	V	A	E	R	V	D	Y	P	L	D	E	L	R	R	F	W	P	D	K	E	A	I	L	Y	D	A	L	R	Y	L	S	Q	Q	I	D	V	W	R	R	Q	L	M	L	D	E	T	Q	T	A	E	Q	K	L	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	E	Q	I	F	S	A	T	D	R	L	X	A	R	E	G	L	N	Q	L	S	X	L	K	L	A	K	E	A	N	V	A	A	G	T	I	Y	L	Y	F	K	N	K	D	E	L	L	E	Q	F	A	H	R	V	F	S	X	F	X	A	T	L	E	K	D	F	D	E	T	K	P	F	F	E	Q	Y	R	Q	X
Template Known Secondary structure																	S		G	G	G										T	T	S										S	S																						T	T			T	T	S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.
Query SS confidence																																																												.	.	.
Query Sequence		R	Y	Q	A	L	S	E	C	V	K	N	N	R	Y	P	G	C	L	F	I	A	A	C	T	F	Y	P	D	P	G	H	P	I	H	Q	L	A	D	Q	Q	K	S	A	A	Y	D	F	T	H	E	L	L	T	T	L	E	V	D	.	.	.	D	P	A	M	V	A	K	Q	M	E	L	V	L	E	G	C	L	S	R
Query Conservation																																																												.	.	.
Alig confidence																							.	.	.	.	.	.																																.	.	.
Template Conservation																							.	.	.	.	.	.
Template Sequence		W	K	N	I	W	Y	F	L	Q	E	N	P	T	I	L	S	N	L	K	Q	Y	.	.	.	.	.	.	E	S	L	P	N	F	K	D	I	C	K	N	I	K	N	C	R	W	D	L	F	C	H	Q	A	Q	K	A	G	L	L	A	E	L	S	E	D	I	L	F	L	L	S	L	K	T	A	I	N	L	A	S	D
Template Known Secondary structure																							.	.	.	.	.	.	T	T	S	T	T							T			S													T	T		B		S	S									T	T								S
Template Predicted Secondary structure																							.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.							.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	V	N	R	S	Q	A	D	V	D	T	A	H	R	L	A	E	D	I	L	R	F	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	F	I	D	F	D	L	K	P	E	I	L	E	S	V	I	E	R	S	W	R	A	I	Q
Template Known Secondary structure																								T	T	B
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions