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Job DescriptionP0ACU7
Confidence99.87%DateThu Jan 5 11:19:05 GMT 2012
Rank8Aligned Residues182
% Identity14%Templatec3qbmA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:tetr transcriptional regulator; PDBTitle: crystal structure of a tetr transcriptional regulator (caur_2221) from2 chloroflexus aurantiacus j-10-fl at 1.80 a resolution
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  QREDVLGEALKLLELQGIANTTLEMVAERVDYPLDELRRFWPDKEAILYDALRYLSQQIDVWRRQLMLDETQTAEQKLLA
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Template Sequence  TRERVVAQAAALFNVSGYAGTAISDIXAATGLEKGGIYRHFESKEQLALAAFDYAAEKVRERFAVGLAGHKHTVDTIIAF
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STT

T

TT
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   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   82.......90.........100.........110.........120.........130...... ...140.........150....
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Query Sequence  RYQALSECVKNNRYPGCLFIAACTFYPDPGHPIHQLADQQKSAAYDFTHELLTTL. . . . . . . EVDDPAMVAKQMELVLEG
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Template Sequence  LDVFRSYAERPPLVGGCPILNTAIESDDTNPXLRERVRAVIDEWRETIRTLVQTGIARGEIRPEVDADRLALLIIATXEG
Template Known Secondary structure  GGGT

SBTTB
TTT
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TT

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   87..90.........100.........110.........120.........130.........140.........150.........160......
 
   155....160.........170.........180...
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Query Sequence  CLSRMLVNRSQADVDTAHRLAEDILRFAR
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Template Sequence  AVXLARILETATPLEHAYTHLATYITQQV
Template Known Secondary structure  TSST
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   167..170.........180.........190.....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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