Job Description P0ACU7 Confidence 99.81% Date Thu Jan 5 11:19:05 GMT 2012 Rank 51 Aligned Residues 176 % Identity 16% Template c3f0cA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of transcriptional regulator from cytophaga2 hutchinsonii atcc 33406 Resolution 2.96 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	E	D	V	L	G	E	A	L	K	L	L	E	L	Q	G	I	A	N	T	T	L	E	M	V	A	E	R	V	D	Y	P	L	D	E	L	R	R	F	W	P	D	K	E	A	I	L	Y	D	A	L	R	Y	L	S	Q	Q	I	D	V	W	R	R	Q	L	M	L	D	E	T	Q	T	A	E	Q	K	L	L	A
Query Conservation
Alig confidence																																																																					.
Template Conservation																																																																					.
Template Sequence		K	L	E	L	I	I	N	A	A	Q	K	R	F	A	H	Y	G	L	C	K	T	T	X	N	E	I	A	S	D	V	G	X	G	K	A	S	L	Y	Y	Y	F	P	D	K	E	T	L	F	E	A	V	I	K	K	E	Q	N	V	F	F	D	E	X	D	K	I	L	.	N	S	G	I	D	A	T	A	L	L	K	K
Template Known Secondary structure																			S	S	S											T											S	S																									.	T	S
Template Predicted Secondary structure																																																																					.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.							.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.
Query Sequence		R	Y	Q	A	L	S	E	C	V	K	N	N	R	Y	P	G	C	L	F	I	A	A	C	T	F	Y	P	D	P	G	H	P	I	H	Q	L	A	D	Q	Q	K	S	A	A	Y	D	F	T	H	E	L	L	T	T	.	.	.	.	.	.	L	E	V	D	D	P	A	M	V	A	K	Q	M	E	L	V	L	E	G	C
Query Conservation																																																								.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.																																				.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.
Template Sequence		Y	V	K	L	R	S	L	H	F	R	H	L	L	.	.	.	.	.	.	N	L	S	K	L	R	S	D	F	T	K	P	V	F	A	K	A	F	E	S	F	K	Q	K	E	V	E	I	V	A	G	I	I	Q	Y	G	I	T	T	K	E	F	K	R	G	N	K	H	E	N	A	E	F	L	V	H	L	L	L	G	V
Template Known Secondary structure															.	.	.	.	.	.					S	S	S																																	T	S	S
Template Predicted Secondary structure															.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.							.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		156	.	.	.	160	.	.	.	.										.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.
Query Sequence		L	S	R	M	L	V	N	R	S	.	.	.	.	.	.	.	.	.	Q	A	D	V	D	T	A	H	R	L	A	E	D	I	L	R	F	A	R	C
Query Conservation											.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	X	V	K	L	K	Y	K	E	I	N	D	F	D	E	S	D	Y	E	D	L	D	K	N	X	C	K	V	A	G	X	F	L	K	E	I	Q	T
Template Known Secondary structure									S		S	S	S			S																				T	T
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions