Job Description P0ACU7 Confidence 99.83% Date Thu Jan 5 11:19:05 GMT 2012 Rank 38 Aligned Residues 175 % Identity 13% Template c3cjdB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of putative tetr transcriptional regulator2 (yp_510936.1) from jannaschia sp. ccs1 at 1.79 a resolution Resolution 1.79 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	D	V	L	G	E	A	L	K	L	L	E	L	Q	G	I	A	N	T	T	L	E	M	V	A	E	R	V	D	Y	P	L	D	E	L	R	R	F	W	P	D	K	E	A	I	L	Y	D	A	L	R	Y	L	S	Q	Q	I	D	V	W	R	R	Q	L	M	L	D	E	T	Q	T	A	E	Q	K	L	L	A	R
Query Conservation
Alig confidence																																																																	.	.	.	.
Template Conservation																																																																	.	.	.	.
Template Sequence		R	E	K	L	I	D	L	A	E	A	Q	I	E	A	E	G	L	A	S	L	R	A	R	E	L	A	R	Q	A	D	C	A	V	G	A	I	Y	T	H	F	Q	D	L	N	A	L	T	L	E	V	N	G	R	T	F	A	R	L	G	A	A	V	G	.	.	.	.	A	V	D	H	P	N	E	R	L	I	A	X	S
Template Known Secondary structure																		G	G	G											T	S									S	S	S																						.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.					.	.	.	.	80	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	A	L	S	E	C	V	K	N	N	R	Y	P	G	C	L	F	I	A	A	C	T	F	Y	P	D	P	G	H	P	I	H	Q	L	A	D	Q	Q	K	S	A	A	Y	D	F	T	H	E	L	L	T	T	L	E	V	D	D	P	A	M	V	A	K	Q	M	E	L	V	L	E	G	C	L	S	R	M	L	V	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	A	Y	L	A	F	A	R	E	H	P	K	L	W	R	A	L	F	D	V	E	X	R	S	D	G	P	V	P	Q	W	Y	G	H	A	X	A	Q	L	F	S	Y	I	T	T	P	L	A	K	I	F	P	E	S	D	D	A	E	L	D	L	X	T	R	T	L	F	S	S	V	H	G	I	V	L	L	G	L	E	N
Template Known Secondary structure											S										S	S			S	S	S																										T	T																										T	T
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		163		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		R	.	S	Q	A	D	V	D	T	A	H	R	L	A	E	D	I	L	R	F
Query Conservation			.
Alig confidence			.
Template Conservation
Template Sequence		R	I	S	G	V	P	G	E	Q	L	K	T	X	I	R	L	L	L	E	Q
Template Known Secondary structure			T	T	S			G	G	G										T	T
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions