Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACU7
Confidence99.83%DateThu Jan 5 11:19:05 GMT 2012
Rank34Aligned Residues187
% Identity13%Templatec3ccyA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:putative tetr-family transcriptional regulator; PDBTitle: crystal structure of a tetr-family transcriptional regulator from2 bordetella parapertussis 12822
Resolution2.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  QREDVLGEALKLLELQGIANTTLEMVAERVDYPLDELRRFWPDKEAILYDALRYLSQQIDVWRRQLMLDETQTAEQKLLA
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Template Sequence  IRDTIIERAAAXFARQGYSETSIGDIARACECSKSRLYHYFDSKEAVLRDXLTTHVDSLLERCRQVLYGSNEPKTRFLQI
Template Known Secondary structure  T
TTTS
TT

GGGGTTT
S
TT
S
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   12.......20.........30.........40.........50.........60.........70.........80.........90.
 
   82.......90.........100.........110.........120.........130.........140 .........150.........
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Query Sequence  RYQALSECVKNNRYPGCLFIAACTFYPDPGHPIHQLADQQKSAAYDFTHELLTTLEVDD. . PAMVAKQMELVLEGCLSRM
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Template Sequence  VKLFLEIYATSRDRHVVXLTCLDALPEDQRKALIAKQRELIAYVRDALLQLRPDXAANRTLAHVDTXLFFGXINWTYTWY
Template Known Secondary structure  GGGS
S
GGGTT
GGGGT
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   92.......100.........110.........120.........130.........140.........150.........160.........170.
 
   160.........170.........180........
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Query Sequence  LVNRSQADVDTAHRLAEDILRFARCRQGG
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Template Sequence  KADGSVSPDALAERTVQLFLDGYLNLLSA
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GGG



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   172.......180.........190.........200
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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