Job Description P0ACU7 Confidence 99.85% Date Thu Jan 5 11:19:05 GMT 2012 Rank 20 Aligned Residues 188 % Identity 14% Template c3anpD_ PDB info PDB header:transcription Chain: D: PDB Molecule:transcriptional repressor, tetr family; PDBTitle: crystal structure of thermus thermophilus fadr, a tetr familly2 transcriptional repressor, in complex with lauroyl-coa. Resolution 1.95 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	E	D	V	L	G	E	A	L	K	L	L	E	L	Q	G	I	A	N	T	T	L	E	M	V	A	E	R	V	D	Y	P	L	D	E	L	R	R	F	W	P	D	K	E	A	I	L	Y	D	A	L	R	Y	L	S	Q	Q	I	D	V	W	R	R	Q	L	M	L	D	E	T	Q	T	A	E	Q	K	L	L	A
Query Conservation
Alig confidence																																																																									.
Template Conservation																																																																									.
Template Sequence		R	R	E	R	I	F	R	A	A	X	E	L	F	R	N	R	G	F	Q	E	T	T	A	T	E	I	A	K	A	A	H	V	S	R	G	T	F	F	N	Y	Y	P	Y	K	E	A	V	L	L	D	Y	G	S	Q	L	L	A	G	L	R	E	E	V	R	R	L	L	A	Q	G	R	.	E	P	V	E	V	L	R	H
Template Known Secondary structure																			T	T	T										T	T											S	S	T																									T	T		.
Template Predicted Secondary structure																																																																									.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.
Query SS confidence																																																												.	.	.
Query Sequence		R	Y	Q	A	L	S	E	C	V	K	N	N	R	Y	P	G	C	L	F	I	A	A	C	T	F	Y	P	D	P	G	H	P	I	H	Q	L	A	D	Q	Q	K	S	A	A	Y	D	F	T	H	E	L	L	T	T	L	E	V	D	.	.	.	D	P	A	M	V	A	K	Q	M	E	L	V	L	E	G	C	L	S	R
Query Conservation																																																												.	.	.
Alig confidence																																																												.	.	.
Template Conservation
Template Sequence		L	F	R	V	L	A	E	G	T	A	R	E	K	D	L	L	L	P	X	F	Y	E	L	L	N	P	D	P	V	R	A	R	A	A	F	E	A	L	P	L	G	D	L	I	A	E	I	L	K	P	L	R	E	Q	G	V	L	R	Q	D	F	S	L	E	R	X	G	R	T	L	A	D	L	Y	F	L	S	A	L	R
Template Known Secondary structure													T											T	T		S	S																												T		S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		M	L	V	N	R	S	Q	A	.	D	V	D	T	A	H	R	L	A	E	D	I	L	R	F	A	R	C	R	Q	G	G	A	L
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		W	A	A	Y	T	P	G	R	D	L	A	E	E	L	E	K	N	L	R	L	L	L	E	G	X	L	V	R	E	A	P	A	P
Template Known Secondary structure					T		T	T	S																	S	S					S	S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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