Job Description P0ACU7 Confidence 99.74% Date Thu Jan 5 11:19:05 GMT 2012 Rank 95 Aligned Residues 173 % Identity 11% Template c2zcmB_ PDB info PDB header:transcription Chain: B: PDB Molecule:biofilm operon icaabcd hth-type negative transcriptional PDBTitle: crystal structure of icar, a repressor of the tetr family Resolution 1.33 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	D	V	L	G	E	A	L	K	L	L	E	L	Q	G	I	A	N	T	T	L	E	M	V	A	E	R	V	D	Y	P	L	D	E	L	R	R	F	W	P	D	K	E	A	I	L	Y	D	A	L	R	Y	L	S	Q	Q	I	D	V	W	R	R	Q	L	M	L	D	E	T	Q	T	A	E	Q	K	L	L	A	R
Query Conservation
Alig confidence																																																																	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.
Template Sequence		K	D	K	I	I	D	N	A	I	T	L	F	S	E	K	G	Y	D	G	T	T	L	D	D	I	S	K	S	V	N	I	K	K	A	S	L	Y	Y	H	Y	D	N	K	E	E	I	Y	R	K	S	V	E	N	C	F	N	Y	F	I	D	F	X	X	.	.	.	.	.	R	N	Y	S	I	D	G	L	Y	Q	F	L
Template Known Secondary structure																		T	T	T										T	T			G	G	G	G	G	G	T		S	S																						.	.	.	.	.	T
Template Predicted Secondary structure																																																																	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.						.	.	.	.	.	70	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140						.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.
Query Sequence		Y	Q	A	L	S	E	C	V	K	N	N	R	Y	P	G	C	L	F	I	A	A	C	T	F	Y	P	D	P	G	H	P	I	H	Q	L	A	D	Q	Q	K	S	A	A	Y	D	F	T	H	E	L	L	T	T	L	E	V	D	D	.	.	.	.	.	P	A	M	V	A	K	Q	M	E	L	V	L	E	G	C	L	S
Query Conservation																																																												.	.	.	.	.
Alig confidence									.	.	.																																																	.	.	.	.	.
Template Conservation									.	.	.
Template Sequence		F	K	F	I	F	D	V	.	.	.	D	E	R	Y	I	K	L	Y	V	Q	L	S	S	A	P	E	A	L	N	S	E	I	K	H	H	L	Q	E	I	N	T	T	L	H	D	E	L	I	K	Y	Y	D	P	T	H	I	A	L	D	K	E	D	F	I	N	X	I	L	X	F	L	E	T	W	Y	F	R	A	S	F
Template Known Secondary structure								S	.	.	.										G	G	G	G	S		G	G	G																				G	G	G			T	T	T	B	S	S
Template Predicted Secondary structure									.	.	.
Template SS confidence
		81	.	.	.	.	.	.				.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	L	V	N	R	S	Q	A	D	V	D	T	A	H	R	L	A	E	D	I	L	R	F	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Q	K	F	G	I	I	E	D	S	K	N	R	F	K	D	Q	V	Y	S	L	L	N	V	F	L
Template Known Secondary structure								G	G	G																	B
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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