Job Description P0ACU7 Confidence 99.64% Date Thu Jan 5 11:19:05 GMT 2012 Rank 116 Aligned Residues 180 % Identity 11% Template c2y31A_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative repressor simreg2; PDBTitle: simocyclinone c4 bound form of tetr-like repressor simr Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	R	E	D	V	L	G	E	A	L	K	L	L	E	L	Q	G	I	A	N	T	T	L	E	M	V	A	E	R	V	D	Y	P	L	D	E	L	R	R	F	W	P	D	K	E	A	I	L	Y	D	A	L	R	Y	L	S	Q	Q	I	D	V	W	R	R	Q	L	M	L	D	E	T	Q	T	A	E	Q	K	L	L
Query Conservation
Alig confidence																																																														.	.	.	.	.
Template Conservation																																																														.	.	.	.	.
Template Sequence		L	S	R	D	Q	I	V	R	A	A	V	K	V	A	D	T	E	G	V	E	A	A	S	M	R	R	V	A	A	E	L	G	A	G	T	M	S	L	Y	Y	Y	V	P	T	K	E	D	L	V	E	L	M	V	D	E	V	I	G	E	T	.	.	.	.	.	R	L	P	D	R	P	G	P	D	W	R	A	A	L	T
Template Known Secondary structure		B																		S	T	T											T							T	T	T			S														T	T		.	.	.	.	.				S	S			S
Template Predicted Secondary structure																																																														.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.						.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.																			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.						.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.
Query Sequence		A	R	Y	Q	A	L	S	E	C	V	K	N	N	R	Y	P	G	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	I	A	A	C	T	F	Y	P	D	P	G	H	P	I	H	Q	L	A	D	Q	Q	K	S	A	A	Y	D	F	T	H	E	L	L	T	T	L	.	.	.	.	.	E
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.
Template Conservation
Template Sequence		L	A	A	N	E	K	R	A	L	W	L	R	H	P	W	L	A	T	A	W	R	N	G	H	P	V	W	G	P	N	S	L	R	Q	Q	E	F	V	L	G	T	L	G	V	F	D	L	Q	V	D	E	L	L	S	L	I	G	L	Y	N	G	Y	V	E	S	F	V	R	N	E	V	G	W	L	E	E	A	R	R	T
Template Known Secondary structure														S	G	G	G	G	T	S				S	S				S													T	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.												.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	D	P	A	M	V	A	K	Q	M	E	L	V	L	E	G	C	.	.	.	.	.	.	.	.	.	.	.	L	S	R	M	L	V	N	R	S	Q	A	D	V	D	T	A	H	R	L	A	E	D	I	L	R	F	A	R	C	R
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	V	D	M	R	E	W	M	R	R	S	G	P	Y	A	Q	Q	L	V	D	S	G	E	Y	P	M	F	A	R	V	L	A	E	T	V	A	P	H	M	G	P	D	Q	R	F	R	S	G	L	E	R	L	L	D	S	I	G	A	S
Template Known Secondary structure		S										T										T	S	S													G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions