Job Description P0ACU7 Confidence 99.72% Date Thu Jan 5 11:19:05 GMT 2012 Rank 105 Aligned Residues 156 % Identity 16% Template c2qwtA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of the tetr transcription regulatory2 protein from mycobacterium vanbaalenii Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	E	D	V	L	G	E	A	L	K	L	L	E	L	Q	G	I	A	N	T	T	L	E	M	V	A	E	R	V	D	Y	P	L	D	E	L	R	R	F	W	P	D	K	E	A	I	L	Y	D	A	L	R	Y	L	S	Q	Q	I	D	V	W	R	R	Q	L	M	L	D	E	T	Q	T	A	E	Q	K	L	L	A
Query Conservation
Alig confidence																				.																																																				.	.
Template Conservation																				.																																																				.	.
Template Sequence		N	R	A	R	V	L	E	V	A	Y	D	T	F	A	A	E	G	L	.	G	V	P	M	D	E	I	A	R	R	A	G	V	G	A	G	T	V	Y	R	H	F	P	T	K	Q	A	L	V	V	A	V	A	E	D	R	V	R	R	I	V	D	H	A	R	T	L	L	A	A	E	.	.	G	P	G	E	A	L	F	V
Template Known Secondary structure																	T		T	.	T	S									T	T	S										S	S																												.	.
Template Predicted Secondary structure																				.																																																				.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	Q	A	L	S	E	C	V	K	N	N	R	Y	P	G	C	L	F	I	A	A	C	T	F	Y	P	D	P	G	H	P	I	H	Q	L	A	D	Q	Q	K	S	A	A	Y	D	F	T	H	E	L	L	T	T	L	E	V	D	D	P	A	M	V	A	K	Q	M	E	L	V	L	E	G	C	L	S	R	M	L	V
Query Conservation
Alig confidence																.	.	.
Template Conservation																.	.	.
Template Sequence		F	M	R	D	M	V	R	S	A	A	A	D	Y	G	.	.	.	L	V	D	A	L	V	G	Y	G	L	D	L	E	V	A	A	P	G	A	E	A	A	F	L	A	T	L	G	E	L	L	A	A	A	Q	R	A	G	T	V	R	A	D	V	D	V	A	V	I	K	A	L	L	V	S	E	R	V	V	R	V	I	E
Template Known Secondary structure																.	.	.							T	T	T							S	T	T																			T	T	S	B		S	S
Template Predicted Secondary structure																.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		162	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G
Template Known Secondary structure			T
Template Predicted Secondary structure
Template SS confidence
		178	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions