Job Description P0ACU7 Confidence 99.87% Date Thu Jan 5 11:19:05 GMT 2012 Rank 10 Aligned Residues 183 % Identity 16% Template c2gfnA_ PDB info PDB header:transcription Chain: A: PDB Molecule:hth-type transcriptional regulator pksa related protein; PDBTitle: crystal structure of hth-type transcriptional regulator pksa related2 protein from rhodococcus sp. rha1 Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	E	D	V	L	G	E	A	L	K	L	L	E	L	Q	G	I	A	N	T	T	L	E	M	V	A	E	R	V	D	Y	P	L	D	E	L	R	R	F	W	P	D	K	E	A	I	L	Y	D	A	L	R	Y	L	S	Q	Q	I	D	V	W	R	R	Q	L	M	L	D	E	T	Q	T	A	E	Q	K	L	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	R	R	A	L	A	D	A	V	L	A	L	I	A	R	E	G	I	S	A	V	T	T	R	A	V	A	E	E	S	G	W	S	T	G	V	L	N	H	Y	F	G	S	R	H	E	L	L	L	A	A	L	R	R	A	G	D	I	Q	G	D	R	Y	R	T	I	L	D	E	E	G	A	G	P	I	E	K	L	R	N
Template Known Secondary structure																			G	G	G											S	S									T	S	S																									T		T	T
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.
Query SS confidence																																																												.	.	.
Query Sequence		R	Y	Q	A	L	S	E	C	V	K	N	N	R	Y	P	G	C	L	F	I	A	A	C	T	F	Y	P	D	P	G	H	P	I	H	Q	L	A	D	Q	Q	K	S	A	A	Y	D	F	T	H	E	L	L	T	T	L	E	V	D	.	.	.	D	P	A	M	V	A	K	Q	M	E	L	V	L	E	G	C	L	S	R
Query Conservation																																																												.	.	.
Alig confidence																											.																																	.	.	.
Template Conservation																											.
Template Sequence		I	T	A	S	I	L	P	L	D	E	R	R	L	A	X	T	R	V	F	L	F	F	Y	A	E	.	G	T	A	R	G	E	I	A	A	F	L	A	R	W	R	G	V	V	R	E	S	V	V	A	A	Q	R	E	G	T	V	S	T	D	L	D	A	D	A	V	T	V	A	L	V	A	L	T	D	G	L	A	L	Q
Template Known Secondary structure					T	T	S			S																	.				S																									T	S	S		T	T	S
Template Predicted Secondary structure																											.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	V	N	R	S	Q	A	D	V	D	T	A	H	R	L	A	E	D	I	L	R	F	A	R	C	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	L	D	P	V	V	X	K	A	I	S	A	E	D	A	A	A	R	C	V	D	A	A	V	R	R
Template Known Secondary structure			T	T									T	S	T	T											T
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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