Job Description P0ACU7 Confidence 99.88% Date Thu Jan 5 11:19:05 GMT 2012 Rank 6 Aligned Residues 179 % Identity 13% Template c2g7sA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: the crystal structure of transcriptional regulator, tetr family, from2 agrobacterium tumefaciens Resolution 1.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	E	D	V	L	G	E	A	L	K	L	L	E	L	Q	G	I	A	N	T	T	L	E	M	V	A	E	R	V	D	Y	P	L	D	E	L	R	R	F	W	P	D	K	E	A	I	L	Y	D	A	L	R	Y	L	S	Q	Q	I	D	V	W	R	R	Q	L	M	L	D	E	T	Q	T	A	E	Q	K	L	L	A
Query Conservation
Alig confidence																																																																									.
Template Conservation																																																																									.
Template Sequence		K	A	D	D	I	L	Q	C	A	R	T	L	I	I	R	G	G	Y	N	S	F	S	Y	A	D	I	S	Q	V	V	G	I	R	N	A	S	I	H	H	H	F	P	S	K	S	D	L	V	C	K	L	V	S	Q	Y	R	Q	E	A	E	A	G	I	A	E	L	E	K	N	I	S	.	D	P	L	E	Q	L	R	A
Template Known Secondary structure																			G	G	G																						S	S																													.
Template Predicted Secondary structure																																																																									.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.								.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.
Query Sequence		R	Y	Q	A	L	S	E	C	V	K	N	N	R	Y	P	G	C	L	F	I	A	A	C	T	F	Y	P	D	P	G	H	P	I	H	Q	L	A	D	Q	Q	K	S	A	A	Y	D	F	T	H	E	L	L	T	T	L	.	.	.	.	.	.	.	E	V	D	D	P	A	M	V	A	K	Q	M	E	L	V	L	E	G
Query Conservation																																																									.	.	.	.	.	.	.
Alig confidence																																																									.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	I	G	Y	W	E	G	C	I	A	D	A	T	H	P	F	C	V	C	A	L	L	A	S	E	I	P	V	L	P	E	T	V	V	L	E	V	R	A	H	F	R	S	L	S	D	W	L	T	A	V	L	E	R	G	I	A	Q	G	R	L	V	L	T	G	T	A	R	A	N	A	E	I	F	X	A	T	V	H	G
Template Known Secondary structure														S	S		S								T	T	G	G	G	S																													T	T		B			S	S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	L	S	R	M	L	V	N	R	S	Q	A	D	V	D	T	A	H	R	L	A	E	D	I	L	R	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	X	L	S	A	R	A	H	G	D	A	A	T	F	G	A	I	T	R	P	X	L	E	R	I	T	A
Template Known Secondary structure								S	S			T	T														B
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions