Job Description P0ACU7 Confidence 99.69% Date Thu Jan 5 11:19:05 GMT 2012 Rank 111 Aligned Residues 183 % Identity 11% Template c1z0xA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of transcriptional regulator, tetr family from2 enterococcus faecalis v583 Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		M	Q	R	E	D	V	L	G	E	A	L	K	L	L	E	L	.	Q	G	I	A	N	T	T	L	E	M	V	A	E	R	V	D	Y	P	L	D	E	L	R	R	F	W	P	D	K	E	A	I	L	Y	D	A	L	R	Y	L	S	Q	Q	I	D	V	W	R	R	Q	L	M	L	D	E	T	Q	T	A	E	Q	K	L
Query Conservation																		.
Alig confidence																		.																																													.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.
Template Sequence		L	S	K	D	T	I	I	A	A	A	F	S	L	L	E	K	S	P	T	L	E	Q	L	S	X	R	K	V	A	K	Q	L	G	V	Q	A	P	A	I	Y	W	Y	F	K	N	K	Q	A	L	L	Q	S	X	A	E	A	I	E	E	H	F	.	.	.	.	.	.	Q	E	P	A	L	C	G	E	W	Y	S	D	L
Template Known Secondary structure			S															S			G	G	G											T	S							T	T		S	S															T		.	.	.	.	.	.							S
Template Predicted Secondary structure																																																															.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.							.	.	.	.	70	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.																		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.
Query Sequence		L	A	R	Y	Q	A	L	S	E	C	V	K	N	N	R	Y	P	G	C	L	F	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	C	T	F	Y	P	D	P	G	H	P	I	H	Q	L	A	D	Q	Q	K	S	A	A	Y	D	F	T	H	E	L	L	T	T	L	.	.	.	.	.	.
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	F	X	E	N	Y	Y	D	L	Y	Q	Q	F	P	C	A	V	A	I	E	I	Q	T	V	P	A	Y	P	Q	R	L	R	H	L	N	Q	X	X	G	I	L	R	E	A	G	F	S	P	E	X	T	H	L	A	V	T	S	L	Q	H	L	L	F	G	X	I	X	D	A	T	E	E	K	Q	L	V	S	Q	V
Template Known Secondary structure															S	T	T							T	S				S																	T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
			137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.						.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																			.	.	.	.	.
Query SS confidence		.																			.	.	.	.	.
Query Sequence		.	E	V	D	D	P	A	M	V	A	K	Q	M	E	L	V	L	E	G	.	.	.	.	.	C	L	S	R	M	L	V	N	R	S	Q	A	D	V	D	T	A	H	R	L	A	E	D	I	L	R	F	A	R	C	R	Q	G	G	A
Query Conservation		.																			.	.	.	.	.
Alig confidence		.																			.	.	.	.	.
Template Conservation
Template Sequence		L	N	G	D	D	Y	L	K	E	Q	V	L	H	X	K	Q	Y	V	S	D	N	E	L	T	Y	X	E	E	S	I	Q	F	H	S	I	H	Q	K	S	A	F	I	Q	A	V	K	T	Y	L	D	G	L	Q	A	D	N	T	S	S
Template Known Secondary structure			T	T																		T	T									T			G	G	G	S																T	T	S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions