Job Description P0ACU7 Confidence 99.76% Date Thu Jan 5 11:19:05 GMT 2012 Rank 89 Aligned Residues 181 % Identity 10% Template c1t33B_ PDB info PDB header:transcription Chain: B: PDB Molecule:putative transcriptional repressor (tetr/acrr family); PDBTitle: structural genomics, the crystal structure of a putative2 transcriptional repressor (tetr/acrr family) from salmonella3 typhimurim lt2 Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.										70	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.
Query Sequence		Q	R	E	D	V	L	G	E	A	L	K	L	L	E	L	Q	G	I	A	N	T	T	L	E	M	V	A	E	R	V	D	Y	P	L	D	E	L	R	R	F	W	P	D	K	E	A	I	L	Y	D	A	L	R	Y	L	S	Q	Q	I	D	V	W	R	R	Q	L	M	L	.	.	.	.	.	.	.	.	.	D	E	T
Query Conservation																																																																						.	.	.	.	.	.	.	.	.
Alig confidence																						.																																																.	.	.	.	.	.	.	.	.
Template Conservation																						.
Template Sequence		A	K	S	Q	L	I	A	A	A	L	A	Q	F	G	E	Y	G	L	H	A	.	T	T	R	D	I	A	A	L	A	G	Q	N	I	A	A	I	T	Y	Y	F	G	S	K	E	D	L	Y	L	A	C	A	Q	W	I	A	D	F	L	G	E	K	F	R	P	H	A	E	K	A	E	R	L	F	S	Q	P	A	P	D
Template Known Secondary structure																		G	G	G	S	.										T	S		T							T		S																															T	T	S	S	S
Template Predicted Secondary structure																						.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																																																		.	.
Query SS confidence																																																																		.	.
Query Sequence		Q	T	A	E	Q	K	L	L	A	R	Y	Q	A	L	S	E	C	V	K	N	N	R	Y	P	G	C	L	F	I	A	A	C	T	F	Y	P	D	P	G	H	P	I	H	Q	L	A	D	Q	Q	K	S	A	A	Y	D	F	T	H	E	L	L	T	T	L	.	.	E	V	D	D	P	A	M	V	A	K	Q	M	E	L
Query Conservation																																																																		.	.
Alig confidence																																																																		.	.
Template Conservation
Template Sequence		R	D	A	I	R	E	L	I	L	L	A	C	K	N	M	I	M	L	L	T	Q	E	D	T	V	N	L	S	K	F	I	S	R	E	Q	L	S	P	T	S	A	Y	Q	L	V	H	E	Q	V	I	D	P	L	H	T	H	L	T	R	L	V	A	A	Y	T	G	C	D	A	N	D	T	R	M	I	L	H	T	H	A
Template Known Secondary structure																				T	T		G	G	G													S												T																	T			T	T	S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		151	.	.	.	.	.	.	.	.	160	.												.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	E	G	C	L	S	R	M	L	V	.	.	.	.	.	.	.	.	.	.	.	N	R	S	Q	A	D	V	D	T	A	H	R	L	A	E	D	I	L	R	F	A	R
Query Conservation													.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	G	E	V	L	A	F	R	L	G	K	E	T	I	L	L	R	T	G	W	P	Q	F	D	E	E	K	A	E	L	I	Y	Q	T	V	T	C	H	I	D	L	I	L
Template Known Secondary structure												T									T		S	S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions