Job Description P0ACU7 Confidence 99.84% Date Thu Jan 5 11:19:05 GMT 2012 Rank 26 Aligned Residues 180 % Identity 14% Template c1rktA_ PDB info PDB header:transcription Chain: A: PDB Molecule:protein yfir; PDBTitle: crystal structure of yfir, a putative transcriptional regulator from2 bacillus subtilis Resolution 1.95 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	E	D	V	L	G	E	A	L	K	L	L	E	L	Q	G	I	A	N	T	T	L	E	M	V	A	E	R	V	D	Y	P	L	D	E	L	R	R	F	W	P	D	K	E	A	I	L	Y	D	A	L	R	Y	L	S	Q	Q	I	D	V	W	R	R	Q	L	M	L	D	E	T	Q	T	A	E	Q	K	L	L	A
Query Conservation
Alig confidence																																																																							.	.
Template Conservation																																																																							.	.
Template Sequence		R	Q	A	E	I	L	E	A	A	K	T	V	F	K	R	K	G	F	E	L	T	T	X	K	D	V	V	E	E	S	G	F	S	R	G	G	V	Y	L	Y	F	S	S	T	E	E	X	F	R	R	I	I	E	T	G	L	D	E	G	L	R	K	L	D	K	S	A	E	H	.	.	Q	S	V	W	A	S	I	S	S
Template Known Secondary structure																			S	T	T											T	S							T	T		S																									T	T	T	.	.	S
Template Predicted Secondary structure																																																																							.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.			.	.	.	.	.	.	.	.	90
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.								.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.
Query Sequence		R	Y	Q	A	L	S	E	C	V	K	N	N	R	Y	P	G	C	L	F	I	A	A	C	T	F	Y	P	D	P	G	H	P	I	H	Q	L	A	D	Q	Q	K	S	A	A	Y	D	F	T	H	E	L	L	T	T	L	.	.	.	.	.	.	.	E	V	D	D	P	A	M	V	A	K	Q	M	E	L	V	L	E	G
Query Conservation																																																									.	.	.	.	.	.	.
Alig confidence																																																									.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	L	D	E	L	T	E	G	L	R	D	V	A	D	T	L	A	P	V	Q	F	E	Y	L	V	T	A	W	R	N	E	E	R	R	Q	Y	L	E	K	R	Y	D	L	F	V	E	R	F	S	R	L	L	Q	K	G	I	D	Q	G	E	F	Q	P	V	Q	P	L	A	T	I	A	K	F	F	L	N	X	N	D	G
Template Known Secondary structure										T	T	T	G	G	G	S	S										G	G	G	G																													T	T					S	S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		155	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		C	L	S	R	M	L	V	N	R	S	Q	A	.	D	V	D	T	A	H	R	L	A	E	D	I	L	R	F	A	R
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		I	I	Q	N	A	L	Y	F	D	E	E	K	A	D	V	S	G	L	A	E	S	A	K	L	Y	L	K	T	V	L
Template Known Secondary structure									S
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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