Job Description P27248 Confidence 2.71% Date Thu Jan 5 11:43:27 GMT 2012 Rank 89 Aligned Residues 92 % Identity 12% Template c3v4gA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:arginine repressor; PDBTitle: 1.60 angstrom resolution crystal structure of an arginine repressor2 from vibrio vulnificus cmcp6 Resolution 1.60 Å

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		67	.	.	70	.	.	.	.	.	.	.	.					.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure														.	.	.	.																								.																																								.
Query SS confidence														.	.	.	.																								.																																								.
Query Sequence		R	Y	L	L	A	N	D	V	A	K	L	T	.	.	.	.	K	S	G	K	A	L	Y	S	G	M	L	N	A	S	G	G	V	I	D	D	L	I	V	.	Y	Y	F	T	E	D	F	F	R	L	V	V	N	S	A	T	R	E	K	D	L	S	W	I	T	Q	H	A	E	P	F	G	I	E	I	T	V	R	D	.
Query Conservation														.	.	.	.																								.																																								.
Alig confidence														.	.	.	.																								.																																								.
Template Conservation
Template Sequence		Q	S	K	V	S	R	M	L	T	K	F	G	A	V	R	T	R	N	A	K	M	E	M	V	Y	C	L	P	T	V	S	S	S	L	R	E	L	V	L	D	V	D	H	N	Q	A	L	V	V	I	H	T	G	P	G	A	A	Q	L	I	A	R	M	L	D	S	L	G	K	S	E	G	I	L	G	V	V	A	G	D
Template Known Secondary structure												T	T							T	T	S									T	T			T	G	G	G								S	S							S	T	T														G	G	G	T								S
Template Predicted Secondary structure
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	S	M	I	A	V	Q	G	P	N	A	Q	A	K	A	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	T	I	F	I	T	P	T	L	T	I	T	T	E	Q	L	F	K
Template Known Secondary structure		S								T	T	S
Template Predicted Secondary structure
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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