Job Description P27248 Confidence 100.00% Date Thu Jan 5 11:43:27 GMT 2012 Rank 9 Aligned Residues 349 % Identity 19% Template c3tfhB_ PDB info PDB header:transferase Chain: B: PDB Molecule:gcvt-like aminomethyltransferase protein; PDBTitle: dmsp-dependent demethylase from p. ubique - apo Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		M	A	Q	Q	T	P	L	Y	E	Q	H	T	L	C	G	A	R	.	M	V	D	F	H	G	W	M	M	P	L	H	Y	G	S	Q	I	D	E	H	H	A	V	R	T	D	A	G	M	F	D	V	S	H	M	T	I	V	D	L	R	G	S	R	T	R	E	F	L	R	Y	L	L	A	N	D	V	A	K	L	T	K
Query Conservation																			.
Alig confidence																			.																																																													.
Template Conservation																																																																																.
Template Sequence		R	L	R	S	T	P	Y	T	S	R	I	E	K	Q	G	V	T	A	Y	T	I	Y	N	H	M	L	L	P	A	A	F	G	S	I	E	D	S	Y	K	H	L	K	E	H	V	Q	I	W	D	V	A	A	E	R	Q	V	E	I	S	G	K	D	S	A	E	L	V	Q	L	M	T	C	R	D	L	S	K	S	.	K
Template Known Secondary structure		T	S	B			T	T					T	T	T	T								T	T							S	S												S							T	T	S							S	T	T									B	S	S			T	T		.
Template Predicted Secondary structure																																																																																.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		S	G	K	A	L	Y	S	G	M	L	N	A	S	G	G	V	I	D	D	L	I	V	Y	Y	F	T	E	D	F	F	R	L	V	V	N	S	A	T	R	E	K	D	L	S	W	I	T	Q	H	A	E	P	F	G	I	E	I	.	T	V	R	D	D	L	S	M	I	A	V	Q	G	P	N	A	Q	A	K	A	A	T
Query Conservation																																																											.
Alig confidence																																																			.	.	.						.
Template Conservation																																																			.	.	.
Template Sequence		I	G	R	C	Y	Y	C	P	I	I	D	E	N	G	N	L	V	N	D	P	V	V	L	K	L	D	E	N	K	W	W	I	S	I	A	D	S	D	V	I	F	F	A	K	G	L	A	S	G	.	.	.	H	K	F	D	V	K	I	V	E	P	V	V	D	I	M	A	I	Q	G	P	K	S	F	A	L	M	E	K
Template Known Secondary structure		T	T	B									T	T	S													T	T								S	S													.	.	.	T	T									S								S	T	T
Template Predicted Secondary structure																																																			.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.				.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.
Predicted Secondary structure																																													.																	.											.
Query SS confidence																																													.																	.											.
Query Sequence		L	F	N	D	A	Q	R	Q	A	V	E	G	M	K	P	F	F	G	V	Q	A	G	D	L	F	I	A	T	T	G	Y	T	G	E	A	G	Y	E	I	A	L	P	N	.	E	K	A	A	D	F	W	R	A	L	V	E	A	G	V	K	.	P	C	G	L	G	A	R	D	T	L	.	R	L	E	A	G	M	N	L
Query Conservation																																													.																	.											.
Alig confidence																																													.																	.											.
Template Conservation
Template Sequence		V	F	G	K	K	I	T	E	L	K	F	F	G	F	D	Y	F	D	F	E	G	T	K	H	L	I	A	R	S	G	W	S	K	Q	G	G	Y	E	V	Y	V	E	N	T	Q	S	G	Q	K	L	Y	D	H	L	F	E	V	G	K	E	F	N	V	G	P	G	C	P	N	L	I	E	R	I	E	S	A	L	L	S
Template Known Secondary structure					G	G	G	G	G			T	T	B							T	T							S			S	S	S	S								S	S															T	G	G	G	T														T	T
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																														.																.
Query SS confidence																														.																.
Query Sequence		Y	G	Q	E	M	D	E	T	I	S	P	L	A	A	N	M	G	W	T	I	A	W	E	P	A	D	R	D	.	F	I	G	R	E	A	L	E	V	Q	R	E	H	G	T	.	E	K	L	V	G	L	V	M	T	E	K	G	V	L	R	N	E	L	P	V	R	F	T	D	A	Q	G	N	Q	H	E	G	I	I	T
Query Conservation																														.																.
Alig confidence																					.	.								.																.																								.	.
Template Conservation																					.	.																																																.	.
Template Sequence		Y	G	N	D	F	D	N	N	D	N	P	F	E	C	G	F	D	Q	Y	.	.	V	S	L	D	S	D	I	N	F	L	G	K	E	K	L	K	E	I	K	L	K	G	P	Q	K	K	L	R	G	V	K	I	D	I	K	E	I	S	L	T	G	S	K	N	I	Y	D	.	.	E	N	N	N	V	I	G	E	L	R
Template Known Secondary structure		B	T	T	T	B		T	T			T	T	T	T	T		G	G	G	.	.				S	S	S				T	T													S									S		S						S							.	.	T	T	S
Template Predicted Secondary structure																					.	.																																																.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.			.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.			.	.	.	.	.	.	.	320	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.				.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.
Query SS confidence																							.	.	.
Query Sequence		S	G	T	F	S	P	T	L	G	Y	S	I	A	L	A	R	V	P	E	G	I	.	.	.	G	E	T	A	I	V	Q	I	R	N	R	E	M	P	V	K	V	T	K	P	V	F	V
Query Conservation																							.	.	.
Alig confidence																							.	.	.
Template Conservation
Template Sequence		S	A	C	Y	S	P	H	F	Q	K	V	I	G	I	A	M	I	K	K	S	H	W	E	A	S	Q	G	F	K	I	Q	I	N	D	N	T	I	N	G	N	V	C	D	L	P	F	I
Template Known Secondary structure							T	T	T	T										G	G	G		S	T	T								T	T										S
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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